Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 LINC00982-205ENST00000420957 435 ntBASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 MTDHP3-201ENST00000594186 672 ntBASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 FRMD8P1-201ENST00000440433 1524 ntBASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 PCDHA14-201ENST00000506751 2298 ntBASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 SIGLEC16-201ENST00000599858 1437 ntBASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF4Q9BSR8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 AL139384.1-201ENST00000612143 3047 ntBASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 NKAPP1-205ENST00000585790 367 ntBASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 AC064862.7-201ENST00000604520 867 ntBASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.02■□□□□ 0.16
YIPF4Q9BSR8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF4Q9BSR8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.02■□□□□ 0.15
YIPF4Q9BSR8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF4Q9BSR8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF4Q9BSR8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.02■□□□□ 0.15
YIPF4Q9BSR8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF4Q9BSR8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms