Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT4P19013 TMEM191A-211ENST00000637163 1067 ntBASIC17.11■□□□□ 0.33
KRT4P19013 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
KRT4P19013 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT4P19013 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT4P19013 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 TUBB8P12-201ENST00000308911 1335 ntBASIC17.11■□□□□ 0.33
KRT4P19013 TUBB7P-202ENST00000428444 1305 ntBASIC17.11■□□□□ 0.33
KRT4P19013 TUBB8P7-204ENST00000567960 1332 ntBASIC17.11■□□□□ 0.33
KRT4P19013 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT4P19013 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT4P19013 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 AL353593.2-201ENST00000602529 1483 ntBASIC17.11■□□□□ 0.33
KRT4P19013 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT4P19013 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT4P19013 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT4P19013 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KRT4P19013 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRT4P19013 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 FAM220CP-201ENST00000395253 831 ntBASIC17.1■□□□□ 0.33
KRT4P19013 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 BX664615.1-201ENST00000443558 458 ntBASIC17.1■□□□□ 0.33
KRT4P19013 STK19B-204ENST00000512515 211 ntBASIC17.1■□□□□ 0.33
KRT4P19013 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.1■□□□□ 0.33
KRT4P19013 AL138831.2-201ENST00000606564 490 ntBASIC17.1■□□□□ 0.33
KRT4P19013 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT4P19013 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT4P19013 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT4P19013 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KRT4P19013 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT4P19013 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KRT4P19013 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT4P19013 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT4P19013 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRT4P19013 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT4P19013 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KRT4P19013 KRT18P38-201ENST00000449496 1282 ntBASIC17.09■□□□□ 0.33
KRT4P19013 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT4P19013 GUSBP12-201ENST00000513727 720 ntBASIC17.09■□□□□ 0.33
KRT4P19013 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
KRT4P19013 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
KRT4P19013 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT4P19013 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT4P19013 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT4P19013 AL365203.3-201ENST00000609742 2057 ntBASIC17.09■□□□□ 0.33
KRT4P19013 MST1L-201ENST00000442552 2185 ntBASIC17.09■□□□□ 0.33
KRT4P19013 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT4P19013 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms