Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SPARCP09486 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SPARCP09486 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
SPARCP09486 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.19■□□□□ 0.02
SPARCP09486 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SPARCP09486 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPARCP09486 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
SPARCP09486 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.18■□□□□ 0.02
SPARCP09486 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.18■□□□□ 0.02
SPARCP09486 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 AC104819.1-201ENST00000504587 486 ntBASIC15.18■□□□□ 0.02
SPARCP09486 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.18■□□□□ 0.02
SPARCP09486 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.18■□□□□ 0.02
SPARCP09486 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.18■□□□□ 0.02
SPARCP09486 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.18■□□□□ 0.02
SPARCP09486 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.18■□□□□ 0.02
SPARCP09486 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.18■□□□□ 0.02
SPARCP09486 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SPARCP09486 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SPARCP09486 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.18■□□□□ 0.02
SPARCP09486 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.18■□□□□ 0.02
SPARCP09486 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
SPARCP09486 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPARCP09486 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.17■□□□□ 0.02
SPARCP09486 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SPARCP09486 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 AC092171.3-201ENST00000610122 2651 ntBASIC15.17■□□□□ 0.02
SPARCP09486 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SPARCP09486 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.17■□□□□ 0.02
SPARCP09486 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPARCP09486 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.17■□□□□ 0.02
SPARCP09486 SIGLEC30P-201ENST00000455569 941 ntBASIC15.17■□□□□ 0.02
SPARCP09486 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SPARCP09486 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms