Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 OR8S1-201ENST00000310194 1080 ntBASIC11.29□□□□□ -0.6
RTL8CO15255 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.29□□□□□ -0.6
RTL8CO15255 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.29□□□□□ -0.6
RTL8CO15255 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 AC092580.3-201ENST00000430932 139 ntBASIC11.29□□□□□ -0.6
RTL8CO15255 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 SERBP1P5-201ENST00000510079 1181 ntBASIC11.29□□□□□ -0.6
RTL8CO15255 CR383656.12-201ENST00000549567 513 ntBASIC11.29□□□□□ -0.6
RTL8CO15255 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.29□□□□□ -0.6
RTL8CO15255 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 AC027307.3-201ENST00000594262 1100 ntBASIC11.29□□□□□ -0.6
RTL8CO15255 AL009183.1-201ENST00000603760 355 ntBASIC11.29□□□□□ -0.6
RTL8CO15255 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 AL358472.5-202ENST00000641448 1267 ntBASIC11.29□□□□□ -0.6
RTL8CO15255 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.29□□□□□ -0.6
RTL8CO15255 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTL8CO15255 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC11.28□□□□□ -0.6
RTL8CO15255 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RTL8CO15255 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
RTL8CO15255 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 HLA-DQB1-201ENST00000374943 1656 ntBASIC11.28□□□□□ -0.6
RTL8CO15255 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.28□□□□□ -0.6
RTL8CO15255 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.28□□□□□ -0.6
RTL8CO15255 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.28□□□□□ -0.6
RTL8CO15255 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.28□□□□□ -0.6
RTL8CO15255 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 ALG1L8P-201ENST00000533887 760 ntBASIC11.28□□□□□ -0.6
RTL8CO15255 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.28□□□□□ -0.6
RTL8CO15255 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.28□□□□□ -0.6
RTL8CO15255 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RTL8CO15255 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 AC025048.6-201ENST00000634326 1161 ntBASIC11.28□□□□□ -0.6
RTL8CO15255 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RTL8CO15255 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 AC026471.1-201ENST00000564629 3026 ntBASIC11.28□□□□□ -0.6
RTL8CO15255 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.28□□□□□ -0.6
RTL8CO15255 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC11.28□□□□□ -0.6
RTL8CO15255 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTL8CO15255 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms