Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOCS3O14543 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.84□□□□□ -0.35
SOCS3O14543 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.84□□□□□ -0.35
SOCS3O14543 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOCS3O14543 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOCS3O14543 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOCS3O14543 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOCS3O14543 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SOCS3O14543 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SOCS3O14543 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
SOCS3O14543 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SOCS3O14543 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
SOCS3O14543 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SOCS3O14543 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.83□□□□□ -0.35
SOCS3O14543 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SOCS3O14543 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SOCS3O14543 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.83□□□□□ -0.36
SOCS3O14543 FGFR3P6-201ENST00000457012 610 ntBASIC12.83□□□□□ -0.36
SOCS3O14543 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SOCS3O14543 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.83□□□□□ -0.36
SOCS3O14543 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 MTDHP3-201ENST00000594186 672 ntBASIC12.83□□□□□ -0.36
SOCS3O14543 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
SOCS3O14543 AL139424.1-201ENST00000607572 797 ntBASIC12.83□□□□□ -0.36
SOCS3O14543 AL589182.2-201ENST00000619332 1049 ntBASIC12.83□□□□□ -0.36
SOCS3O14543 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 AL645728.1-201ENST00000366221 2101 ntBASIC12.83□□□□□ -0.36
SOCS3O14543 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SOCS3O14543 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOCS3O14543 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SOCS3O14543 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.82□□□□□ -0.36
SOCS3O14543 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.82□□□□□ -0.36
SOCS3O14543 AC243591.1-201ENST00000452967 1364 ntBASIC12.82□□□□□ -0.36
SOCS3O14543 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.82□□□□□ -0.36
SOCS3O14543 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
SOCS3O14543 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.82□□□□□ -0.36
SOCS3O14543 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
SOCS3O14543 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.82□□□□□ -0.36
SOCS3O14543 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SOCS3O14543 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms