Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CSDC2Q9Y534 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
CSDC2Q9Y534 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 RNF152P1-201ENST00000397754 604 ntBASIC11.83□□□□□ -0.52
CSDC2Q9Y534 TSPY5P-201ENST00000426936 936 ntBASIC11.83□□□□□ -0.52
CSDC2Q9Y534 AC246785.2-201ENST00000432512 513 ntBASIC11.83□□□□□ -0.52
CSDC2Q9Y534 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 AC009533.2-201ENST00000543664 586 ntBASIC11.83□□□□□ -0.52
CSDC2Q9Y534 AC090616.6-201ENST00000582640 721 ntBASIC11.83□□□□□ -0.52
CSDC2Q9Y534 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 AC139887.4-201ENST00000607877 719 ntBASIC11.83□□□□□ -0.52
CSDC2Q9Y534 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.83□□□□□ -0.52
CSDC2Q9Y534 HYMAI-201ENST00000635591 3347 ntBASIC11.83□□□□□ -0.52
CSDC2Q9Y534 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 AC113347.1-201ENST00000413321 391 ntBASIC11.82□□□□□ -0.52
CSDC2Q9Y534 AC087499.1-201ENST00000418141 1075 ntBASIC11.82□□□□□ -0.52
CSDC2Q9Y534 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 RNF126P1-202ENST00000569893 925 ntBASIC11.82□□□□□ -0.52
CSDC2Q9Y534 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 AC011840.4-201ENST00000578471 627 ntBASIC11.82□□□□□ -0.52
CSDC2Q9Y534 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 MTHFR-217ENST00000641820 1569 ntBASIC11.82□□□□□ -0.52
CSDC2Q9Y534 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CSDC2Q9Y534 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms