Protein–RNA interactions for Protein: Q9H0Z9

RBM38, RNA-binding protein 38, humanhuman

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38Q9H0Z9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 AC113404.2-201ENST00000507884 177 ntBASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 GGT3P-204ENST00000453783 1664 ntBASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM38Q9H0Z9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 RPS2P4-201ENST00000476944 856 ntBASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RBM38Q9H0Z9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 AL671710.1-201ENST00000610245 2349 ntBASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 AC005252.3-201ENST00000623855 2258 ntBASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
RBM38Q9H0Z9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBM38Q9H0Z9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBM38Q9H0Z9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.26■□□□□ 0.03
RBM38Q9H0Z9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBM38Q9H0Z9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms