Protein–RNA interactions for Protein: Q96PD5

PGLYRP2, N-acetylmuramoyl-L-alanine amidase, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGLYRP2Q96PD5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 OR6D1P-202ENST00000641007 5290 ntBASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 KRT18P28-201ENST00000453838 1332 ntBASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 METTL21AP1-201ENST00000438852 635 ntBASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 AP002472.1-201ENST00000577490 586 ntBASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGLYRP2Q96PD5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 AC093525.9-201ENST00000624961 1746 ntBASIC18.02■□□□□ 0.48
PGLYRP2Q96PD5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.02■□□□□ 0.47
PGLYRP2Q96PD5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 PKD1P1-201ENST00000458669 6805 ntBASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 EGFEM1P-202ENST00000431685 1563 ntBASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 AC027796.2-201ENST00000575326 344 ntBASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.01■□□□□ 0.47
PGLYRP2Q96PD5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms