Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 AC246785.2-201ENST00000432512 513 ntBASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 AC124947.2-201ENST00000547118 1133 ntBASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 AL391005.1-201ENST00000623953 2435 ntBASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 KRT18P1-202ENST00000452408 1331 ntBASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTN4IP1Q8WWV3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 AL845331.1-201ENST00000424978 1190 ntBASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 AC069148.1-201ENST00000608741 768 ntBASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 CYP2T1P-202ENST00000641596 2535 ntBASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RTN4IP1Q8WWV3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms