Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD2Q7Z408 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 MYCLP2-201ENST00000449268 967 ntBASIC14.14□□□□□ -0.15
CSMD2Q7Z408 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 AC010319.3-201ENST00000597028 470 ntBASIC14.14□□□□□ -0.15
CSMD2Q7Z408 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CSMD2Q7Z408 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 RNU1-129P-201ENST00000384064 167 ntBASIC14.13□□□□□ -0.15
CSMD2Q7Z408 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 AC087499.6-201ENST00000411576 835 ntBASIC14.13□□□□□ -0.15
CSMD2Q7Z408 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 U1.21-201ENST00000580816 167 ntBASIC14.13□□□□□ -0.15
CSMD2Q7Z408 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 AC093525.8-201ENST00000624099 1342 ntBASIC14.13□□□□□ -0.15
CSMD2Q7Z408 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 AC243960.2-201ENST00000600996 747 ntBASIC14.13□□□□□ -0.15
CSMD2Q7Z408 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CSMD2Q7Z408 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms