Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.89□□□□□ -0.03
FOXG1P55316 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
FOXG1P55316 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
FOXG1P55316 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
FOXG1P55316 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.89□□□□□ -0.03
FOXG1P55316 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.89□□□□□ -0.03
FOXG1P55316 AL513480.1-201ENST00000451731 511 ntBASIC14.89□□□□□ -0.03
FOXG1P55316 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.89□□□□□ -0.03
FOXG1P55316 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.89□□□□□ -0.03
FOXG1P55316 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
FOXG1P55316 KRT19P2-202ENST00000557173 1012 ntBASIC14.89□□□□□ -0.03
FOXG1P55316 AC040169.1-201ENST00000565382 521 ntBASIC14.89□□□□□ -0.03
FOXG1P55316 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 AC023511.2-201ENST00000618803 211 ntBASIC14.89□□□□□ -0.03
FOXG1P55316 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.89□□□□□ -0.03
FOXG1P55316 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.89□□□□□ -0.03
FOXG1P55316 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
FOXG1P55316 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.89□□□□□ -0.03
FOXG1P55316 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
FOXG1P55316 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FOXG1P55316 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.88□□□□□ -0.03
FOXG1P55316 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FOXG1P55316 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
FOXG1P55316 SLC22A20-204ENST00000530038 1673 ntBASIC14.88□□□□□ -0.03
FOXG1P55316 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
FOXG1P55316 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
FOXG1P55316 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.88□□□□□ -0.03
FOXG1P55316 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FOXG1P55316 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.88□□□□□ -0.03
FOXG1P55316 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.88□□□□□ -0.03
FOXG1P55316 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.88□□□□□ -0.03
FOXG1P55316 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.88□□□□□ -0.03
FOXG1P55316 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.88□□□□□ -0.03
FOXG1P55316 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.88□□□□□ -0.03
FOXG1P55316 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
FOXG1P55316 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FOXG1P55316 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 AC005915.1-201ENST00000624912 2018 ntBASIC14.88□□□□□ -0.03
FOXG1P55316 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FOXG1P55316 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.88□□□□□ -0.03
FOXG1P55316 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.88□□□□□ -0.03
FOXG1P55316 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXG1P55316 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
FOXG1P55316 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
FOXG1P55316 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms