Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB3BP20337 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3BP20337 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RAB3BP20337 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB3BP20337 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB3BP20337 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.97□□□□□ -0.01
RAB3BP20337 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB3BP20337 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB3BP20337 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
RAB3BP20337 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB3BP20337 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 MTHFR-217ENST00000641820 1569 ntBASIC14.97□□□□□ -0.01
RAB3BP20337 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
RAB3BP20337 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3BP20337 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RAB3BP20337 AL645728.1-201ENST00000366221 2101 ntBASIC14.96□□□□□ -0.01
RAB3BP20337 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB3BP20337 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 AL158047.1-201ENST00000445918 881 ntBASIC14.96□□□□□ -0.01
RAB3BP20337 ECEL1P2-202ENST00000465689 757 ntBASIC14.96□□□□□ -0.01
RAB3BP20337 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB3BP20337 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB3BP20337 AC079602.3-201ENST00000623931 403 ntBASIC14.96□□□□□ -0.01
RAB3BP20337 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB3BP20337 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAB3BP20337 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3BP20337 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3BP20337 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3BP20337 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
RAB3BP20337 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
RAB3BP20337 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RAB3BP20337 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3BP20337 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB3BP20337 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3BP20337 GPR89P-201ENST00000407924 1495 ntBASIC14.95□□□□□ -0.02
RAB3BP20337 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RAB3BP20337 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3BP20337 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3BP20337 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3BP20337 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB3BP20337 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms