Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.88■□□□□ 0.45
ERBB2P04626 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERBB2P04626 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ERBB2P04626 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ERBB2P04626 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERBB2P04626 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERBB2P04626 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERBB2P04626 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERBB2P04626 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.87■□□□□ 0.45
ERBB2P04626 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.87■□□□□ 0.45
ERBB2P04626 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ERBB2P04626 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ERBB2P04626 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ERBB2P04626 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 IGHV3-22-201ENST00000520721 359 ntBASIC17.87■□□□□ 0.45
ERBB2P04626 AC107918.2-201ENST00000530817 355 ntBASIC17.87■□□□□ 0.45
ERBB2P04626 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.87■□□□□ 0.45
ERBB2P04626 OR7E47P-204ENST00000575924 449 ntBASIC17.87■□□□□ 0.45
ERBB2P04626 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.87■□□□□ 0.45
ERBB2P04626 GGTLC5P-201ENST00000617623 998 ntBASIC17.87■□□□□ 0.45
ERBB2P04626 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.87■□□□□ 0.45
ERBB2P04626 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.87■□□□□ 0.45
ERBB2P04626 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.87■□□□□ 0.45
ERBB2P04626 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ERBB2P04626 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERBB2P04626 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.86■□□□□ 0.45
ERBB2P04626 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
ERBB2P04626 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.86■□□□□ 0.45
ERBB2P04626 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
ERBB2P04626 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.86■□□□□ 0.45
ERBB2P04626 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 AC093909.1-201ENST00000504731 1122 ntBASIC17.86■□□□□ 0.45
ERBB2P04626 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.86■□□□□ 0.45
ERBB2P04626 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.86■□□□□ 0.45
ERBB2P04626 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.86■□□□□ 0.45
ERBB2P04626 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.86■□□□□ 0.45
ERBB2P04626 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.86■□□□□ 0.45
ERBB2P04626 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.86■□□□□ 0.45
ERBB2P04626 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERBB2P04626 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.86■□□□□ 0.45
ERBB2P04626 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
ERBB2P04626 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 AC099398.1-201ENST00000567919 2776 ntBASIC17.85■□□□□ 0.45
ERBB2P04626 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.85■□□□□ 0.45
ERBB2P04626 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ERBB2P04626 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ERBB2P04626 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERBB2P04626 TOP3BP1-201ENST00000420768 1380 ntBASIC17.85■□□□□ 0.45
ERBB2P04626 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.85■□□□□ 0.45
ERBB2P04626 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.85■□□□□ 0.45
ERBB2P04626 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms