Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 AC246785.2-201ENST00000432512 513 ntBASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 AC002558.1-201ENST00000488906 803 ntBASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 AP005901.3-202ENST00000581653 237 ntBASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 AP002383.4-201ENST00000442518 975 ntBASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 VENTXP7-201ENST00000475503 772 ntBASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 AL139327.4-201ENST00000612362 153 ntBASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 AL358472.4-201ENST00000633140 710 ntBASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 AP000550.4-202ENST00000639755 178 ntBASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHRDL1Q9BU40 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 PCDHB19P-201ENST00000570871 2371 ntBASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms