Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 AK4P3-201ENST00000418260 669 ntBASIC12.98□□□□□ -0.33
VGLL1Q99990 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 AC092647.4-201ENST00000457211 535 ntBASIC12.98□□□□□ -0.33
VGLL1Q99990 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.98□□□□□ -0.33
VGLL1Q99990 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.98□□□□□ -0.33
VGLL1Q99990 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.98□□□□□ -0.33
VGLL1Q99990 AC111152.3-201ENST00000569699 673 ntBASIC12.98□□□□□ -0.33
VGLL1Q99990 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 LINC01023-201ENST00000606054 436 ntBASIC12.98□□□□□ -0.33
VGLL1Q99990 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.98□□□□□ -0.33
VGLL1Q99990 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 EGFEM1P-202ENST00000431685 1563 ntBASIC12.98□□□□□ -0.33
VGLL1Q99990 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.98□□□□□ -0.33
VGLL1Q99990 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VGLL1Q99990 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 KRT8P10-201ENST00000450021 1447 ntBASIC12.97□□□□□ -0.33
VGLL1Q99990 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VGLL1Q99990 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.97□□□□□ -0.33
VGLL1Q99990 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
VGLL1Q99990 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 SPDYE13P-201ENST00000445314 798 ntBASIC12.97□□□□□ -0.33
VGLL1Q99990 AC122714.2-201ENST00000502787 707 ntBASIC12.97□□□□□ -0.33
VGLL1Q99990 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.97□□□□□ -0.33
VGLL1Q99990 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.97□□□□□ -0.33
VGLL1Q99990 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.97□□□□□ -0.33
VGLL1Q99990 AC006011.2-201ENST00000621313 1158 ntBASIC12.97□□□□□ -0.33
VGLL1Q99990 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VGLL1Q99990 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VGLL1Q99990 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 AL662844.4-201ENST00000606367 2838 ntBASIC12.97□□□□□ -0.33
VGLL1Q99990 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.97□□□□□ -0.33
VGLL1Q99990 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.97□□□□□ -0.33
VGLL1Q99990 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VGLL1Q99990 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
VGLL1Q99990 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.96□□□□□ -0.33
VGLL1Q99990 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
VGLL1Q99990 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.96□□□□□ -0.33
VGLL1Q99990 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VGLL1Q99990 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.96□□□□□ -0.33
VGLL1Q99990 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 LINC00554-201ENST00000564841 3011 ntBASIC12.96□□□□□ -0.33
VGLL1Q99990 PCDHA1-201ENST00000378133 2726 ntBASIC12.96□□□□□ -0.33
VGLL1Q99990 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VGLL1Q99990 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms