Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC9.48□□□□□ -0.89
SEC61GP60059 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC9.48□□□□□ -0.89
SEC61GP60059 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC9.48□□□□□ -0.89
SEC61GP60059 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC9.48□□□□□ -0.89
SEC61GP60059 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 AC009237.3-201ENST00000393279 1427 ntBASIC9.48□□□□□ -0.89
SEC61GP60059 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 KRT8P36-201ENST00000489121 1440 ntBASIC9.48□□□□□ -0.89
SEC61GP60059 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC9.48□□□□□ -0.89
SEC61GP60059 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SEC61GP60059 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC9.48□□□□□ -0.89
SEC61GP60059 AL512791.2-201ENST00000615251 4609 ntBASIC9.47□□□□□ -0.89
SEC61GP60059 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 AC092135.3-201ENST00000624151 1846 ntBASIC9.47□□□□□ -0.89
SEC61GP60059 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 ZNF277-203ENST00000421043 2218 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 FAM21FP-204ENST00000608637 956 ntBASIC9.47□□□□□ -0.89
SEC61GP60059 SRP68-213ENST00000629930 165 ntTSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 APP-205ENST00000358918 2366 ntTSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SEC61GP60059 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC9.47□□□□□ -0.89
SEC61GP60059 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC9.47□□□□□ -0.89
SEC61GP60059 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SEC61GP60059 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC9.46□□□□□ -0.89
SEC61GP60059 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC9.46□□□□□ -0.89
SEC61GP60059 PCDHGB8P-202ENST00000507007 2873 ntBASIC9.46□□□□□ -0.89
SEC61GP60059 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
SEC61GP60059 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
SEC61GP60059 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC9.46□□□□□ -0.89
SEC61GP60059 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC9.46□□□□□ -0.89
SEC61GP60059 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
SEC61GP60059 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC9.46□□□□□ -0.89
SEC61GP60059 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 CWC25-202ENST00000614790 3234 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SEC61GP60059 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SEC61GP60059 NPTN-IT1-201ENST00000628401 2283 ntBASIC9.46□□□□□ -0.9
SEC61GP60059 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SEC61GP60059 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
SEC61GP60059 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms