RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 DCAF8L2P0C7V8 631 aa22.66■■□□□ 1.22
CACNA1F-201ENST00000323022 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
CACNA1F-201ENST00000323022 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
CACNA1F-201ENST00000323022 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
CACNA1F-201ENST00000323022 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
CACNA1F-201ENST00000323022 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
CACNA1F-201ENST00000323022 APLP2Q06481 763 aa19.73■□□□□ 0.75
CACNA1F-201ENST00000323022 RANGAP1P46060 587 aaPredicted RBP19.71■□□□□ 0.75
CACNA1F-201ENST00000323022 ATP1B4Q9UN42 357 aaPredicted RBP19.65■□□□□ 0.74
CACNA1F-201ENST00000323022 TTBK1Q5TCY1 1321 aaPredicted RBP19.54■□□□□ 0.72
CACNA1F-201ENST00000323022 MYT1LQ9UL68 1186 aa19.41■□□□□ 0.7
CACNA1F-201ENST00000323022 PELP1Q8IZL8 1130 aaKnown RBP19.28■□□□□ 0.68
CACNA1F-201ENST00000323022 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
CACNA1F-201ENST00000323022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
CACNA1F-201ENST00000323022 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
CACNA1F-201ENST00000323022 UBTFP17480 764 aaKnown RBP18.87■□□□□ 0.61
CACNA1F-201ENST00000323022 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
CACNA1F-201ENST00000323022 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
CACNA1F-201ENST00000323022 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.57
CACNA1F-201ENST00000323022 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
CACNA1F-201ENST00000323022 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
CACNA1F-201ENST00000323022 FBLN2P98095 1184 aa18.54■□□□□ 0.56
CACNA1F-201ENST00000323022 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
CACNA1F-201ENST00000323022 ITGAEP38570 1179 aa18.45■□□□□ 0.54
CACNA1F-201ENST00000323022 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
CACNA1F-201ENST00000323022 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
CACNA1F-201ENST00000323022 CNGB1Q14028 1251 aaPredicted RBP18.38■□□□□ 0.53
CACNA1F-201ENST00000323022 ABCC9O60706 1549 aa18.33■□□□□ 0.53
CACNA1F-201ENST00000323022 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.52
CACNA1F-201ENST00000323022 BCANQ96GW7 911 aa18.33■□□□□ 0.52
CACNA1F-201ENST00000323022 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
CACNA1F-201ENST00000323022 MYT1Q01538 1121 aa18.12■□□□□ 0.49
CACNA1F-201ENST00000323022 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
CACNA1F-201ENST00000323022 ESF1Q9H501 851 aaKnown RBP18.06■□□□□ 0.48
CACNA1F-201ENST00000323022 NEFLP07196 543 aa18.05■□□□□ 0.48
CACNA1F-201ENST00000323022 ARID3CA6NKF2 412 aa18■□□□□ 0.47
CACNA1F-201ENST00000323022 YTHDC1Q96MU7 727 aaKnown RBP17.91■□□□□ 0.46
CACNA1F-201ENST00000323022 ZEB1P37275 1124 aaPredicted RBP17.9■□□□□ 0.46
CACNA1F-201ENST00000323022 TRIM52Q96A61 297 aa17.89■□□□□ 0.46
CACNA1F-201ENST00000323022 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
CACNA1F-201ENST00000323022 NPM1P06748 294 aaKnown RBP eCLIP17.87■□□□□ 0.45
CACNA1F-201ENST00000323022 STAG3Q9UJ98 1225 aa17.8■□□□□ 0.44
CACNA1F-201ENST00000323022 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
CACNA1F-201ENST00000323022 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
CACNA1F-201ENST00000323022 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.43
CACNA1F-201ENST00000323022 A0A0G2JS52 829 aa17.74■□□□□ 0.43
CACNA1F-201ENST00000323022 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
CACNA1F-201ENST00000323022 ZNF777Q9ULD5 760 aaPredicted RBP17.71■□□□□ 0.43
CACNA1F-201ENST00000323022 P3H3Q8IVL6 736 aa17.67■□□□□ 0.42
CACNA1F-201ENST00000323022 CHGAP10645 457 aaKnown RBP17.67■□□□□ 0.42
CACNA1F-201ENST00000323022 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
CACNA1F-201ENST00000323022 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
CACNA1F-201ENST00000323022 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
CACNA1F-201ENST00000323022 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
CACNA1F-201ENST00000323022 NEUROD1Q13562 356 aa17.52■□□□□ 0.4
CACNA1F-201ENST00000323022 NEFMP07197 916 aa17.48■□□□□ 0.39
CACNA1F-201ENST00000323022 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
CACNA1F-201ENST00000323022 ZBTB47Q9UFB7 747 aaPredicted RBP17.48■□□□□ 0.39
CACNA1F-201ENST00000323022 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
CACNA1F-201ENST00000323022 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
CACNA1F-201ENST00000323022 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
CACNA1F-201ENST00000323022 HAP1P54257 671 aaPredicted RBP17.37■□□□□ 0.37
CACNA1F-201ENST00000323022 HRCP23327 699 aa17.36■□□□□ 0.37
CACNA1F-201ENST00000323022 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
CACNA1F-201ENST00000323022 CDK11AQ9UQ88 783 aaPredicted RBP17.33■□□□□ 0.36
CACNA1F-201ENST00000323022 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
CACNA1F-201ENST00000323022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
CACNA1F-201ENST00000323022 CANXP27824 592 aaKnown RBP17.27■□□□□ 0.36
CACNA1F-201ENST00000323022 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
CACNA1F-201ENST00000323022 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
CACNA1F-201ENST00000323022 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
CACNA1F-201ENST00000323022 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
CACNA1F-201ENST00000323022 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
CACNA1F-201ENST00000323022 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
CACNA1F-201ENST00000323022 RTL5Q5HYW3 569 aaPredicted RBP17.17■□□□□ 0.34
CACNA1F-201ENST00000323022 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
CACNA1F-201ENST00000323022 ARXQ96QS3 562 aa17.1■□□□□ 0.33
CACNA1F-201ENST00000323022 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
CACNA1F-201ENST00000323022 LMOD2Q6P5Q4 547 aa17.08■□□□□ 0.32
CACNA1F-201ENST00000323022 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
CACNA1F-201ENST00000323022 NPHP1O15259 732 aa17■□□□□ 0.31
CACNA1F-201ENST00000323022 MLECQ14165 292 aa16.99■□□□□ 0.31
CACNA1F-201ENST00000323022 CHIC2Q9UKJ5 165 aa16.98■□□□□ 0.31
CACNA1F-201ENST00000323022 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
CACNA1F-201ENST00000323022 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
CACNA1F-201ENST00000323022 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
CACNA1F-201ENST00000323022 ANP32CO43423 234 aa16.88■□□□□ 0.29
CACNA1F-201ENST00000323022 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
CACNA1F-201ENST00000323022 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
CACNA1F-201ENST00000323022 GTF3C3Q9Y5Q9 886 aa16.78■□□□□ 0.28
CACNA1F-201ENST00000323022 TULP1O00294 542 aaPredicted RBP16.78■□□□□ 0.28
CACNA1F-201ENST00000323022 SALL2Q9Y467 1007 aaPredicted RBP16.77■□□□□ 0.27
CACNA1F-201ENST00000323022 PLEKHD1A6NEE1 506 aa16.76■□□□□ 0.27
CACNA1F-201ENST00000323022 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
CACNA1F-201ENST00000323022 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
CACNA1F-201ENST00000323022 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
CACNA1F-201ENST00000323022 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
CACNA1F-201ENST00000323022 RGL3Q3MIN7 710 aa16.65■□□□□ 0.26
CACNA1F-201ENST00000323022 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
CACNA1F-201ENST00000323022 NACADO15069 1562 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms