Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE1AP54750 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDE1AP54750 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
PDE1AP54750 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 AC124067.4-201ENST00000519691 2379 ntBASIC20.79■□□□□ 0.92
PDE1AP54750 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDE1AP54750 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE1AP54750 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.79■□□□□ 0.92
PDE1AP54750 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE1AP54750 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE1AP54750 AL160237.2-201ENST00000556165 472 ntBASIC20.79■□□□□ 0.92
PDE1AP54750 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.79■□□□□ 0.92
PDE1AP54750 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE1AP54750 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE1AP54750 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE1AP54750 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE1AP54750 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PDE1AP54750 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
PDE1AP54750 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE1AP54750 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PDE1AP54750 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.78■□□□□ 0.92
PDE1AP54750 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDE1AP54750 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 TOP3BP1-201ENST00000420768 1380 ntBASIC20.78■□□□□ 0.92
PDE1AP54750 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.78■□□□□ 0.92
PDE1AP54750 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.78■□□□□ 0.92
PDE1AP54750 AC105339.3-201ENST00000560043 636 ntBASIC20.78■□□□□ 0.92
PDE1AP54750 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.78■□□□□ 0.92
PDE1AP54750 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 AL118508.1-201ENST00000613502 2345 ntBASIC20.78■□□□□ 0.92
PDE1AP54750 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PDE1AP54750 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE1AP54750 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE1AP54750 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE1AP54750 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE1AP54750 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE1AP54750 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE1AP54750 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE1AP54750 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE1AP54750 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.77■□□□□ 0.92
PDE1AP54750 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PDE1AP54750 RNA5SP419-201ENST00000515908 135 ntBASIC20.77■□□□□ 0.92
PDE1AP54750 AP002490.2-201ENST00000524791 560 ntBASIC20.77■□□□□ 0.92
PDE1AP54750 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.77■□□□□ 0.92
PDE1AP54750 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
PDE1AP54750 AL049840.3-201ENST00000602669 611 ntBASIC20.77■□□□□ 0.92
PDE1AP54750 AL356488.2-201ENST00000602755 427 ntBASIC20.77■□□□□ 0.92
PDE1AP54750 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.77■□□□□ 0.92
PDE1AP54750 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE1AP54750 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE1AP54750 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDE1AP54750 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE1AP54750 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDE1AP54750 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDE1AP54750 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.77■□□□□ 0.91
PDE1AP54750 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDE1AP54750 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
PDE1AP54750 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE1AP54750 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDE1AP54750 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.76■□□□□ 0.91
PDE1AP54750 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE1AP54750 UBALD1-205ENST00000590891 2641 ntBASIC20.76■□□□□ 0.91
PDE1AP54750 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE1AP54750 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.76■□□□□ 0.91
PDE1AP54750 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDE1AP54750 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
PDE1AP54750 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDE1AP54750 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PDE1AP54750 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms