Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM21P19474 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM21P19474 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM21P19474 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM21P19474 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM21P19474 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM21P19474 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM21P19474 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM21P19474 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM21P19474 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM21P19474 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM21P19474 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM21P19474 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM21P19474 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM21P19474 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRIM21P19474 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM21P19474 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM21P19474 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM21P19474 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM21P19474 TSPY19P-201ENST00000418461 509 ntBASIC18.85■□□□□ 0.61
TRIM21P19474 TSPY18P-201ENST00000441642 509 ntBASIC18.85■□□□□ 0.61
TRIM21P19474 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM21P19474 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM21P19474 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM21P19474 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM21P19474 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM21P19474 AC018695.7-201ENST00000624587 2492 ntBASIC18.85■□□□□ 0.61
TRIM21P19474 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
TRIM21P19474 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
TRIM21P19474 RNF216P1-203ENST00000404404 2427 ntBASIC18.85■□□□□ 0.61
TRIM21P19474 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRIM21P19474 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM21P19474 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM21P19474 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM21P19474 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.85■□□□□ 0.61
TRIM21P19474 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM21P19474 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM21P19474 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM21P19474 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM21P19474 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM21P19474 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM21P19474 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM21P19474 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM21P19474 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM21P19474 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM21P19474 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.84■□□□□ 0.61
TRIM21P19474 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 MIR5100-201ENST00000579544 119 ntBASIC18.84■□□□□ 0.61
TRIM21P19474 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.84■□□□□ 0.61
TRIM21P19474 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
TRIM21P19474 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM21P19474 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM21P19474 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM21P19474 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM21P19474 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM21P19474 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TRIM21P19474 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM21P19474 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM21P19474 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRIM21P19474 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TRIM21P19474 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM21P19474 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRIM21P19474 AC079328.2-201ENST00000561241 3354 ntBASIC18.83■□□□□ 0.61
TRIM21P19474 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM21P19474 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM21P19474 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM21P19474 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRIM21P19474 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM21P19474 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM21P19474 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM21P19474 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM21P19474 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms