Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC3P19447 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ERCC3P19447 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
ERCC3P19447 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
ERCC3P19447 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ERCC3P19447 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC3P19447 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ERCC3P19447 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC3P19447 MIR770-201ENST00000390219 98 ntBASIC19.73■□□□□ 0.75
ERCC3P19447 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC3P19447 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC3P19447 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 GNAS-203ENST00000306120 1878 ntBASIC19.73■□□□□ 0.75
ERCC3P19447 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ERCC3P19447 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ERCC3P19447 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC3P19447 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC3P19447 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ERCC3P19447 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC3P19447 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC3P19447 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.72■□□□□ 0.75
ERCC3P19447 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ERCC3P19447 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ERCC3P19447 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.72■□□□□ 0.75
ERCC3P19447 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.72■□□□□ 0.75
ERCC3P19447 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ERCC3P19447 AC022145.2-201ENST00000598203 171 ntBASIC19.72■□□□□ 0.75
ERCC3P19447 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.72■□□□□ 0.75
ERCC3P19447 PP12613-201ENST00000424958 2230 ntBASIC19.72■□□□□ 0.75
ERCC3P19447 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC3P19447 AL121761.2-201ENST00000598007 1648 ntBASIC19.72■□□□□ 0.75
ERCC3P19447 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.72■□□□□ 0.75
ERCC3P19447 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.72■□□□□ 0.75
ERCC3P19447 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC3P19447 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ERCC3P19447 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
ERCC3P19447 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC3P19447 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ERCC3P19447 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.71■□□□□ 0.75
ERCC3P19447 AC087163.2-201ENST00000457299 853 ntBASIC19.71■□□□□ 0.75
ERCC3P19447 AC004449.1-201ENST00000564240 433 ntBASIC19.71■□□□□ 0.75
ERCC3P19447 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.71■□□□□ 0.75
ERCC3P19447 AL139327.4-201ENST00000612362 153 ntBASIC19.71■□□□□ 0.75
ERCC3P19447 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC3P19447 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 PKD1P1-201ENST00000458669 6805 ntBASIC19.71■□□□□ 0.75
ERCC3P19447 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.71■□□□□ 0.75
ERCC3P19447 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ERCC3P19447 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC3P19447 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC3P19447 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ERCC3P19447 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC3P19447 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ERCC3P19447 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.7■□□□□ 0.74
ERCC3P19447 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.7■□□□□ 0.74
ERCC3P19447 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms