Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SSSCA1O60232 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 TSPY14P-201ENST00000303979 915 ntBASIC13.96□□□□□ -0.17
SSSCA1O60232 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.96□□□□□ -0.17
SSSCA1O60232 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.96□□□□□ -0.17
SSSCA1O60232 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 IGHV3-52-201ENST00000519770 353 ntBASIC13.96□□□□□ -0.17
SSSCA1O60232 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.96□□□□□ -0.17
SSSCA1O60232 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.96□□□□□ -0.17
SSSCA1O60232 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.96□□□□□ -0.17
SSSCA1O60232 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
SSSCA1O60232 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.96□□□□□ -0.17
SSSCA1O60232 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.96□□□□□ -0.17
SSSCA1O60232 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
SSSCA1O60232 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SSSCA1O60232 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSSCA1O60232 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSSCA1O60232 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSSCA1O60232 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSSCA1O60232 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.96□□□□□ -0.18
SSSCA1O60232 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SSSCA1O60232 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SSSCA1O60232 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.96□□□□□ -0.18
SSSCA1O60232 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SSSCA1O60232 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.95□□□□□ -0.18
SSSCA1O60232 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SSSCA1O60232 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 INGX-201ENST00000359239 846 ntBASIC13.95□□□□□ -0.18
SSSCA1O60232 AP000523.1-201ENST00000398242 1049 ntBASIC13.95□□□□□ -0.18
SSSCA1O60232 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.95□□□□□ -0.18
SSSCA1O60232 AC128688.1-201ENST00000487626 519 ntBASIC13.95□□□□□ -0.18
SSSCA1O60232 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.95□□□□□ -0.18
SSSCA1O60232 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.95□□□□□ -0.18
SSSCA1O60232 AC024909.3-201ENST00000611513 2257 ntBASIC13.95□□□□□ -0.18
SSSCA1O60232 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSSCA1O60232 AL365209.1-201ENST00000624418 6473 ntBASIC13.95□□□□□ -0.18
SSSCA1O60232 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.94□□□□□ -0.18
SSSCA1O60232 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SSSCA1O60232 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms