Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 PCDHB18P-201ENST00000524813 2368 ntBASIC19.57■□□□□ 0.72
PNMA3Q9UL41 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PNMA3Q9UL41 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 UGT1A2P-201ENST00000454886 866 ntBASIC19.56■□□□□ 0.72
PNMA3Q9UL41 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 MIR3909-201ENST00000579518 119 ntBASIC19.56■□□□□ 0.72
PNMA3Q9UL41 LINC02560-201ENST00000596379 459 ntBASIC19.56■□□□□ 0.72
PNMA3Q9UL41 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PNMA3Q9UL41 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 MIR661-201ENST00000384842 89 ntBASIC19.55■□□□□ 0.72
PNMA3Q9UL41 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 ALG1L8P-201ENST00000533887 760 ntBASIC19.55■□□□□ 0.72
PNMA3Q9UL41 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 AL031055.1-201ENST00000606362 631 ntBASIC19.55■□□□□ 0.72
PNMA3Q9UL41 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PNMA3Q9UL41 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 AP000842.3-202ENST00000569238 1080 ntBASIC19.54■□□□□ 0.72
PNMA3Q9UL41 AC091167.2-201ENST00000579581 588 ntBASIC19.54■□□□□ 0.72
PNMA3Q9UL41 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.54■□□□□ 0.72
PNMA3Q9UL41 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms