Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NPAS2Q99743 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS2Q99743 AC006449.5-201ENST00000610658 2098 ntBASIC16.76■□□□□ 0.27
NPAS2Q99743 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.76■□□□□ 0.27
NPAS2Q99743 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NPAS2Q99743 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS2Q99743 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS2Q99743 RN7SL510P-201ENST00000581311 263 ntBASIC16.76■□□□□ 0.27
NPAS2Q99743 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS2Q99743 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 AL353801.3-201ENST00000609898 542 ntBASIC16.76■□□□□ 0.27
NPAS2Q99743 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.76■□□□□ 0.27
NPAS2Q99743 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.76■□□□□ 0.27
NPAS2Q99743 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS2Q99743 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS2Q99743 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.76■□□□□ 0.27
NPAS2Q99743 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS2Q99743 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NPAS2Q99743 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.75■□□□□ 0.27
NPAS2Q99743 PCDHB17P-201ENST00000539533 2393 ntBASIC16.75■□□□□ 0.27
NPAS2Q99743 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.75■□□□□ 0.27
NPAS2Q99743 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.75■□□□□ 0.27
NPAS2Q99743 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.75■□□□□ 0.27
NPAS2Q99743 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
NPAS2Q99743 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 AC112698.1-201ENST00000510299 916 ntBASIC16.75■□□□□ 0.27
NPAS2Q99743 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.75■□□□□ 0.27
NPAS2Q99743 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.75■□□□□ 0.27
NPAS2Q99743 Z69720.1-201ENST00000601483 472 ntBASIC16.75■□□□□ 0.27
NPAS2Q99743 IFNL4P1-201ENST00000607083 540 ntBASIC16.75■□□□□ 0.27
NPAS2Q99743 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 AC092068.3-201ENST00000587894 2016 ntBASIC16.75■□□□□ 0.27
NPAS2Q99743 AC026691.1-201ENST00000602502 2017 ntBASIC16.75■□□□□ 0.27
NPAS2Q99743 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS2Q99743 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NPAS2Q99743 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS2Q99743 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPAS2Q99743 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.74■□□□□ 0.27
NPAS2Q99743 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS2Q99743 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
NPAS2Q99743 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.74■□□□□ 0.27
NPAS2Q99743 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.74■□□□□ 0.27
NPAS2Q99743 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
NPAS2Q99743 TPM4P1-201ENST00000436100 807 ntBASIC16.74■□□□□ 0.27
NPAS2Q99743 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 AC111152.3-201ENST00000569699 673 ntBASIC16.74■□□□□ 0.27
NPAS2Q99743 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.74■□□□□ 0.27
NPAS2Q99743 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS2Q99743 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms