Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 MIR7706-201ENST00000613747 67 ntBASIC18.25■□□□□ 0.51
LMO3Q8TAP4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LMO3Q8TAP4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 OR7E47P-204ENST00000575924 449 ntBASIC18.24■□□□□ 0.51
LMO3Q8TAP4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO3Q8TAP4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.23■□□□□ 0.51
LMO3Q8TAP4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMO3Q8TAP4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 AL031284.1-201ENST00000419297 478 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms