Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 AC002558.1-201ENST00000488906 803 ntBASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 AC103810.3-201ENST00000583567 96 ntBASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 TEX28P1-201ENST00000613479 1221 ntBASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 TEX28P2-201ENST00000617764 1221 ntBASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 AC007613.1-201ENST00000572811 2597 ntBASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RSPO4Q2I0M5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 SPDYE19P-201ENST00000338590 713 ntBASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 RN7SL190P-201ENST00000582519 257 ntBASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 AC244093.1-201ENST00000610837 814 ntBASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 AC009113.1-201ENST00000570267 2443 ntBASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 AL023806.1-201ENST00000603994 1649 ntBASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms