Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PTPN6P29350 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PTPN6P29350 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN6P29350 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN6P29350 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN6P29350 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.22■□□□□ 0.19
PTPN6P29350 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN6P29350 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN6P29350 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.22■□□□□ 0.19
PTPN6P29350 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN6P29350 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 AL645728.1-201ENST00000366221 2101 ntBASIC16.22■□□□□ 0.19
PTPN6P29350 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN6P29350 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN6P29350 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PTPN6P29350 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PTPN6P29350 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN6P29350 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN6P29350 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTPN6P29350 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTPN6P29350 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 RCN1P2-201ENST00000398357 915 ntBASIC16.21■□□□□ 0.19
PTPN6P29350 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN6P29350 DUX4L17-201ENST00000557360 1267 ntBASIC16.21■□□□□ 0.19
PTPN6P29350 MIR5100-201ENST00000579544 119 ntBASIC16.21■□□□□ 0.19
PTPN6P29350 RN7SL510P-201ENST00000581311 263 ntBASIC16.21■□□□□ 0.19
PTPN6P29350 LINC01711-201ENST00000598340 967 ntBASIC16.21■□□□□ 0.19
PTPN6P29350 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN6P29350 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PTPN6P29350 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN6P29350 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN6P29350 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN6P29350 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN6P29350 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN6P29350 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.21■□□□□ 0.18
PTPN6P29350 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN6P29350 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN6P29350 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN6P29350 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PTPN6P29350 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN6P29350 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 KLF4P1-201ENST00000412782 1185 ntBASIC16.2■□□□□ 0.18
PTPN6P29350 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
PTPN6P29350 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN6P29350 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.2■□□□□ 0.18
PTPN6P29350 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN6P29350 AL121894.2-201ENST00000602977 491 ntBASIC16.2■□□□□ 0.18
PTPN6P29350 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms