Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 BX005266.1-201ENST00000473402 457 ntBASIC17.04■□□□□ 0.32
CHRM3P20309 KRT18P56-201ENST00000507275 550 ntBASIC17.04■□□□□ 0.32
CHRM3P20309 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRM3P20309 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRM3P20309 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRM3P20309 AC073592.4-201ENST00000623827 446 ntBASIC17.04■□□□□ 0.32
CHRM3P20309 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHRM3P20309 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CHRM3P20309 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHRM3P20309 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRM3P20309 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CHRM3P20309 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
CHRM3P20309 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CHRM3P20309 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CHRM3P20309 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHRM3P20309 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHRM3P20309 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHRM3P20309 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRM3P20309 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRM3P20309 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHRM3P20309 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHRM3P20309 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRM3P20309 CLEC4GP1-201ENST00000596555 870 ntBASIC17.03■□□□□ 0.32
CHRM3P20309 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRM3P20309 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRM3P20309 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRM3P20309 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 AL356309.3-201ENST00000624132 1934 ntBASIC17.02■□□□□ 0.32
CHRM3P20309 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHRM3P20309 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRM3P20309 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRM3P20309 GPR89P-201ENST00000407924 1495 ntBASIC17.02■□□□□ 0.32
CHRM3P20309 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRM3P20309 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRM3P20309 ACTG1P4-201ENST00000425123 1122 ntBASIC17.02■□□□□ 0.32
CHRM3P20309 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRM3P20309 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRM3P20309 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRM3P20309 NKAPP1-205ENST00000585790 367 ntBASIC17.02■□□□□ 0.32
CHRM3P20309 AC012313.10-201ENST00000623509 926 ntBASIC17.02■□□□□ 0.32
CHRM3P20309 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CHRM3P20309 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRM3P20309 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRM3P20309 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.02■□□□□ 0.31
CHRM3P20309 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CHRM3P20309 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CHRM3P20309 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRM3P20309 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRM3P20309 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRM3P20309 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRM3P20309 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRM3P20309 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRM3P20309 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRM3P20309 AC092068.3-201ENST00000587894 2016 ntBASIC17.01■□□□□ 0.31
CHRM3P20309 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRM3P20309 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRM3P20309 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms