Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VAPBO95292 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.18■□□□□ 0.34
VAPBO95292 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.18■□□□□ 0.34
VAPBO95292 LINC00982-205ENST00000420957 435 ntBASIC17.18■□□□□ 0.34
VAPBO95292 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.18■□□□□ 0.34
VAPBO95292 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.18■□□□□ 0.34
VAPBO95292 BX005266.1-201ENST00000473402 457 ntBASIC17.18■□□□□ 0.34
VAPBO95292 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VAPBO95292 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.18■□□□□ 0.34
VAPBO95292 AC106795.1-205ENST00000512851 1056 ntBASIC17.18■□□□□ 0.34
VAPBO95292 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.18■□□□□ 0.34
VAPBO95292 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.18■□□□□ 0.34
VAPBO95292 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.18■□□□□ 0.34
VAPBO95292 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 AC078925.2-201ENST00000624013 1973 ntBASIC17.18■□□□□ 0.34
VAPBO95292 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VAPBO95292 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
VAPBO95292 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.18■□□□□ 0.34
VAPBO95292 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
VAPBO95292 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.18■□□□□ 0.34
VAPBO95292 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VAPBO95292 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.18■□□□□ 0.34
VAPBO95292 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.17■□□□□ 0.34
VAPBO95292 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.17■□□□□ 0.34
VAPBO95292 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.17■□□□□ 0.34
VAPBO95292 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.17■□□□□ 0.34
VAPBO95292 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.17■□□□□ 0.34
VAPBO95292 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.17■□□□□ 0.34
VAPBO95292 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
VAPBO95292 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
VAPBO95292 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
VAPBO95292 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.17■□□□□ 0.34
VAPBO95292 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VAPBO95292 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.16■□□□□ 0.34
VAPBO95292 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.16■□□□□ 0.34
VAPBO95292 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.16■□□□□ 0.34
VAPBO95292 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.16■□□□□ 0.34
VAPBO95292 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VAPBO95292 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VAPBO95292 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VAPBO95292 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.16■□□□□ 0.34
VAPBO95292 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.16■□□□□ 0.34
VAPBO95292 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.16■□□□□ 0.34
VAPBO95292 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.16■□□□□ 0.34
VAPBO95292 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.16■□□□□ 0.34
VAPBO95292 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.16■□□□□ 0.34
VAPBO95292 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.16■□□□□ 0.34
VAPBO95292 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.16■□□□□ 0.34
VAPBO95292 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms