Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.37■□□□□ 0.05
UBL3O95164 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 TSPY19P-201ENST00000418461 509 ntBASIC15.37■□□□□ 0.05
UBL3O95164 TSPY18P-201ENST00000441642 509 ntBASIC15.37■□□□□ 0.05
UBL3O95164 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.37■□□□□ 0.05
UBL3O95164 KRT18P31-201ENST00000506277 1292 ntBASIC15.37■□□□□ 0.05
UBL3O95164 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.37■□□□□ 0.05
UBL3O95164 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 AC109462.3-201ENST00000573934 613 ntBASIC15.37■□□□□ 0.05
UBL3O95164 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UBL3O95164 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.37■□□□□ 0.05
UBL3O95164 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.37■□□□□ 0.05
UBL3O95164 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBL3O95164 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
UBL3O95164 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UBL3O95164 FER1L4-210ENST00000615531 5998 ntBASIC15.36■□□□□ 0.05
UBL3O95164 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
UBL3O95164 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
UBL3O95164 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
UBL3O95164 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
UBL3O95164 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.36■□□□□ 0.05
UBL3O95164 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.36■□□□□ 0.05
UBL3O95164 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
UBL3O95164 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.36■□□□□ 0.05
UBL3O95164 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.36■□□□□ 0.05
UBL3O95164 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.36■□□□□ 0.05
UBL3O95164 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.36■□□□□ 0.05
UBL3O95164 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.36■□□□□ 0.05
UBL3O95164 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.36■□□□□ 0.05
UBL3O95164 AC019129.2-201ENST00000609837 1235 ntBASIC15.36■□□□□ 0.05
UBL3O95164 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.36■□□□□ 0.05
UBL3O95164 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UBL3O95164 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
UBL3O95164 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
UBL3O95164 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
UBL3O95164 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBL3O95164 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 AC016396.2-201ENST00000562575 1417 ntBASIC15.35■□□□□ 0.05
UBL3O95164 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UBL3O95164 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
UBL3O95164 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UBL3O95164 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
UBL3O95164 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.35■□□□□ 0.05
UBL3O95164 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
UBL3O95164 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.35■□□□□ 0.05
UBL3O95164 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.35■□□□□ 0.05
UBL3O95164 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.35■□□□□ 0.05
UBL3O95164 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
UBL3O95164 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
UBL3O95164 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
UBL3O95164 AD001527.2-201ENST00000622994 785 ntBASIC15.35■□□□□ 0.05
UBL3O95164 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
UBL3O95164 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.35■□□□□ 0.05
UBL3O95164 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.35■□□□□ 0.05
UBL3O95164 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
UBL3O95164 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBL3O95164 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms