Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 AC133681.1-201ENST00000465482 601 ntBASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 RN7SL850P-201ENST00000579959 291 ntBASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 AC012306.2-201ENST00000609350 630 ntBASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 AC110285.5-201ENST00000611501 352 ntBASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC173Q0VFZ6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 TNRC18P2-201ENST00000417666 2714 ntBASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC173Q0VFZ6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC173Q0VFZ6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC173Q0VFZ6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC173Q0VFZ6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC173Q0VFZ6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC173Q0VFZ6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC173Q0VFZ6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 AL355355.2-201ENST00000442321 338 ntBASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 AC008687.5-201ENST00000593746 558 ntBASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 CD177P1-201ENST00000606252 935 ntBASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC173Q0VFZ6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms