Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN2P51788 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN2P51788 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CLCN2P51788 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN2P51788 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 PKD1P1-201ENST00000458669 6805 ntBASIC16.62■□□□□ 0.25
CLCN2P51788 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN2P51788 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN2P51788 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN2P51788 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN2P51788 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CLCN2P51788 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN2P51788 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN2P51788 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN2P51788 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN2P51788 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN2P51788 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 TPM4P1-201ENST00000436100 807 ntBASIC16.61■□□□□ 0.25
CLCN2P51788 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN2P51788 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLCN2P51788 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCN2P51788 BNIP3P18-201ENST00000593976 575 ntBASIC16.61■□□□□ 0.25
CLCN2P51788 AL138831.2-201ENST00000606564 490 ntBASIC16.61■□□□□ 0.25
CLCN2P51788 AL732292.2-201ENST00000609649 430 ntBASIC16.61■□□□□ 0.25
CLCN2P51788 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.61■□□□□ 0.25
CLCN2P51788 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN2P51788 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLCN2P51788 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN2P51788 AC125634.1-201ENST00000438758 1403 ntBASIC16.61■□□□□ 0.25
CLCN2P51788 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN2P51788 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN2P51788 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN2P51788 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN2P51788 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN2P51788 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN2P51788 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCN2P51788 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCN2P51788 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.6■□□□□ 0.25
CLCN2P51788 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN2P51788 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN2P51788 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCN2P51788 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 IFNL4P1-201ENST00000607083 540 ntBASIC16.6■□□□□ 0.25
CLCN2P51788 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLCN2P51788 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.6■□□□□ 0.25
CLCN2P51788 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 AC016396.2-201ENST00000562575 1417 ntBASIC16.6■□□□□ 0.25
CLCN2P51788 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms