Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
GDNFP39905 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
GDNFP39905 STARP1-201ENST00000397973 869 ntBASIC14.96□□□□□ -0.01
GDNFP39905 TMPOP1-202ENST00000424642 1267 ntBASIC14.96□□□□□ -0.01
GDNFP39905 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.96□□□□□ -0.01
GDNFP39905 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.96□□□□□ -0.01
GDNFP39905 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.96□□□□□ -0.01
GDNFP39905 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
GDNFP39905 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
GDNFP39905 AL136038.4-201ENST00000603606 1261 ntBASIC14.96□□□□□ -0.01
GDNFP39905 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.96□□□□□ -0.01
GDNFP39905 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.96□□□□□ -0.01
GDNFP39905 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
GDNFP39905 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
GDNFP39905 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GDNFP39905 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
GDNFP39905 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
GDNFP39905 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
GDNFP39905 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.96□□□□□ -0.02
GDNFP39905 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GDNFP39905 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
GDNFP39905 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
GDNFP39905 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 AC093525.9-201ENST00000624961 1746 ntBASIC14.95□□□□□ -0.02
GDNFP39905 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.95□□□□□ -0.02
GDNFP39905 AC005104.2-201ENST00000427818 678 ntBASIC14.95□□□□□ -0.02
GDNFP39905 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.95□□□□□ -0.02
GDNFP39905 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
GDNFP39905 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.95□□□□□ -0.02
GDNFP39905 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.95□□□□□ -0.02
GDNFP39905 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDNFP39905 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.94□□□□□ -0.02
GDNFP39905 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.94□□□□□ -0.02
GDNFP39905 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
GDNFP39905 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.94□□□□□ -0.02
GDNFP39905 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GDNFP39905 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.94□□□□□ -0.02
GDNFP39905 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GDNFP39905 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GDNFP39905 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
GDNFP39905 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms