Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.14□□□□□ -0.15
SNCAP37840 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SNCAP37840 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.14□□□□□ -0.15
SNCAP37840 PAUPAR-201ENST00000630360 2965 ntBASIC14.14□□□□□ -0.15
SNCAP37840 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SNCAP37840 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SNCAP37840 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SNCAP37840 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SNCAP37840 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SNCAP37840 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SNCAP37840 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.13□□□□□ -0.15
SNCAP37840 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.13□□□□□ -0.15
SNCAP37840 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SNCAP37840 AC141257.4-201ENST00000634557 245 ntBASIC14.13□□□□□ -0.15
SNCAP37840 AC136944.6-201ENST00000634818 245 ntBASIC14.13□□□□□ -0.15
SNCAP37840 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 AL031432.5-201ENST00000641059 760 ntBASIC14.13□□□□□ -0.15
SNCAP37840 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SNCAP37840 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SNCAP37840 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SNCAP37840 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.13□□□□□ -0.15
SNCAP37840 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNCAP37840 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SNCAP37840 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
SNCAP37840 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms