Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CTNND1O60716 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CTNND1O60716 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CTNND1O60716 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.88■□□□□ 0.77
CTNND1O60716 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CTNND1O60716 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CTNND1O60716 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTNND1O60716 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CTNND1O60716 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.88■□□□□ 0.77
CTNND1O60716 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.88■□□□□ 0.77
CTNND1O60716 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.88■□□□□ 0.77
CTNND1O60716 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CTNND1O60716 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTNND1O60716 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 AL354751.1-201ENST00000412768 1863 ntBASIC19.88■□□□□ 0.77
CTNND1O60716 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTNND1O60716 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.88■□□□□ 0.77
CTNND1O60716 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.87■□□□□ 0.77
CTNND1O60716 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CTNND1O60716 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.87■□□□□ 0.77
CTNND1O60716 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 PMS2P4-201ENST00000412466 1052 ntBASIC19.87■□□□□ 0.77
CTNND1O60716 KLF2P3-201ENST00000451977 1087 ntBASIC19.87■□□□□ 0.77
CTNND1O60716 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.87■□□□□ 0.77
CTNND1O60716 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.87■□□□□ 0.77
CTNND1O60716 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.87■□□□□ 0.77
CTNND1O60716 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.87■□□□□ 0.77
CTNND1O60716 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTNND1O60716 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.87■□□□□ 0.77
CTNND1O60716 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CTNND1O60716 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CTNND1O60716 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTNND1O60716 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 UXT-AS1-201ENST00000590504 1525 ntBASIC19.86■□□□□ 0.77
CTNND1O60716 AL390961.4-201ENST00000623958 2535 ntBASIC19.86■□□□□ 0.77
CTNND1O60716 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.86■□□□□ 0.77
CTNND1O60716 WASH6P-202ENST00000359512 1437 ntBASIC19.86■□□□□ 0.77
CTNND1O60716 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.86■□□□□ 0.77
CTNND1O60716 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.86■□□□□ 0.77
CTNND1O60716 INGX-202ENST00000489074 768 ntBASIC19.86■□□□□ 0.77
CTNND1O60716 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CTNND1O60716 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.86■□□□□ 0.77
CTNND1O60716 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.86■□□□□ 0.77
CTNND1O60716 AC026150.2-201ENST00000564693 1156 ntBASIC19.86■□□□□ 0.77
CTNND1O60716 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.86■□□□□ 0.77
CTNND1O60716 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CTNND1O60716 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.86■□□□□ 0.77
CTNND1O60716 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.86■□□□□ 0.77
CTNND1O60716 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms