Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.645e-6■■□□□ 11.6
CSTF2TQ9H0L4 WWP2-218ENST00000569620 738 ntTSL 511.01□□□□□ -0.655e-6■■□□□ 11.6
CSTF2TQ9H0L4 NSD2-202ENST00000353275 7980 ntTSL 1 (best)10.76□□□□□ -0.695e-6■■□□□ 11.6
CSTF2TQ9H0L4 LRP8-211ENST00000496580 507 ntTSL 210.65□□□□□ -0.75e-6■■□□□ 11.6
CSTF2TQ9H0L4 RPS11-206ENST00000600027 944 ntTSL 510.62□□□□□ -0.715e-6■■□□□ 11.6
CSTF2TQ9H0L4 RPS11-204ENST00000599167 1133 ntTSL 510.62□□□□□ -0.715e-6■■□□□ 11.6
CSTF2TQ9H0L4 DGAT1-208ENST00000620428 444 ntTSL 210.54□□□□□ -0.722e-6■■□□□ 11.6
CSTF2TQ9H0L4 AC233992.1-201ENST00000525023 444 ntTSL 2 BASIC10.54□□□□□ -0.722e-6■■□□□ 11.6
CSTF2TQ9H0L4 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC10.05□□□□□ -0.85e-6■■□□□ 11.6
CSTF2TQ9H0L4 TBC1D14-202ENST00000410031 4201 ntTSL 5 BASIC10.03□□□□□ -0.85e-6■■□□□ 11.6
CSTF2TQ9H0L4 EMP2-202ENST00000359543 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.815e-6■■□□□ 11.6
CSTF2TQ9H0L4 AHNAK-203ENST00000525875 793 ntTSL 39.94□□□□□ -0.825e-6■■□□□ 11.6
CSTF2TQ9H0L4 NSD2-201ENST00000312087 8050 ntTSL 1 (best)9.85□□□□□ -0.835e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-206ENST00000538195 560 ntTSL 59.84□□□□□ -0.835e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-206ENST00000502372 1026 ntTSL 59.73□□□□□ -0.855e-6■■□□□ 11.6
CSTF2TQ9H0L4 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC9.69□□□□□ -0.865e-6■■□□□ 11.6
CSTF2TQ9H0L4 WWP2-204ENST00000561780 574 ntTSL 49.53□□□□□ -0.885e-6■■□□□ 11.6
CSTF2TQ9H0L4 ZNF846-207ENST00000589412 683 ntTSL 59.19□□□□□ -0.945e-6■■□□□ 11.6
CSTF2TQ9H0L4 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC9.17□□□□□ -0.945e-6■■□□□ 11.6
CSTF2TQ9H0L4 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.955e-6■■□□□ 11.6
CSTF2TQ9H0L4 WWP2-206ENST00000563659 561 ntTSL 49.07□□□□□ -0.965e-6■■□□□ 11.6
CSTF2TQ9H0L4 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.995e-6■■□□□ 11.6
CSTF2TQ9H0L4 SOX13-207ENST00000528591 597 ntTSL 48.34□□□□□ -1.075e-6■■□□□ 11.6
CSTF2TQ9H0L4 ZNF846-204ENST00000587650 561 ntTSL 48.11□□□□□ -1.115e-6■■□□□ 11.6
CSTF2TQ9H0L4 ZNF846-209ENST00000590471 427 ntTSL 38.06□□□□□ -1.125e-6■■□□□ 11.6
CSTF2TQ9H0L4 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.125e-6■■□□□ 11.6
CSTF2TQ9H0L4 NXN-207ENST00000574018 508 ntTSL 37.79□□□□□ -1.165e-6■■□□□ 11.6
CSTF2TQ9H0L4 NT5C2-205ENST00000452156 856 ntTSL 57.77□□□□□ -1.175e-6■■□□□ 11.6
CSTF2TQ9H0L4 RPS11-209ENST00000602252 751 ntTSL 27.71□□□□□ -1.185e-6■■□□□ 11.6
CSTF2TQ9H0L4 TMEM120A-206ENST00000465494 509 ntTSL 37.7□□□□□ -1.185e-6■■□□□ 11.6
CSTF2TQ9H0L4 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.68□□□□□ -1.185e-6■■□□□ 11.6
CSTF2TQ9H0L4 NSD2-221ENST00000511904 690 ntTSL 57.43□□□□□ -1.225e-6■■□□□ 11.6
CSTF2TQ9H0L4 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.29□□□□□ -1.245e-6■■□□□ 11.6
CSTF2TQ9H0L4 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.285e-6■■□□□ 11.6
CSTF2TQ9H0L4 EMP2-201ENST00000342147 3582 ntTSL 26.89□□□□□ -1.315e-6■■□□□ 11.6
CSTF2TQ9H0L4 RPS11-208ENST00000601306 547 ntTSL 36.75□□□□□ -1.335e-6■■□□□ 11.6
CSTF2TQ9H0L4 NT5C2-202ENST00000369857 2625 ntTSL 26.71□□□□□ -1.335e-6■■□□□ 11.6
CSTF2TQ9H0L4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.345e-6■■□□□ 11.6
CSTF2TQ9H0L4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.4□□□□□ -1.385e-6■■□□□ 11.6
CSTF2TQ9H0L4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.725e-6■■□□□ 11.6
CSTF2TQ9H0L4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.261e-10■■□□□ 11.6
CSTF2TQ9H0L4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.261e-10■■□□□ 11.6
CSTF2TQ9H0L4 PPP1R18-204ENST00000488324 1328 ntTSL 313.28□□□□□ -0.281e-10■■□□□ 11.6
CSTF2TQ9H0L4 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.551e-10■■□□□ 11.6
CSTF2TQ9H0L4 PPP1R18-203ENST00000467662 1156 ntTSL 311.51□□□□□ -0.571e-10■■□□□ 11.6
CSTF2TQ9H0L4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.343e-6■■□□□ 11.6
CSTF2TQ9H0L4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.78■■□□□ 1.243e-6■■□□□ 11.6
CSTF2TQ9H0L4 HOMER3-209ENST00000596482 866 ntTSL 517.98■□□□□ 0.473e-6■■□□□ 11.6
CSTF2TQ9H0L4 HOMER3-212ENST00000600077 675 ntTSL 313.2□□□□□ -0.33e-6■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-213ENST00000574701 553 ntTSL 422.6■■□□□ 1.215e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.725e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-204ENST00000570798 593 ntTSL 416.83■□□□□ 0.285e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.215e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.36■□□□□ 0.215e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.195e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-212ENST00000573332 773 ntTSL 415.96■□□□□ 0.155e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.05■□□□□ -05e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.05■□□□□ -05e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.15e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-208ENST00000571627 579 ntTSL 413.63□□□□□ -0.235e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.4□□□□□ -0.425e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.455e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-219ENST00000576334 556 ntTSL 411.18□□□□□ -0.625e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-206ENST00000571277 587 ntTSL 410.69□□□□□ -0.75e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-216ENST00000574848 554 ntTSL 49.88□□□□□ -0.835e-7■■□□□ 11.6
CSTF2TQ9H0L4 LITAF-207ENST00000571459 677 ntTSL 5 BASIC9.52□□□□□ -0.895e-7■■□□□ 11.6
CSTF2TQ9H0L4 NCOA1-207ENST00000469850 537 ntTSL 515.8■□□□□ 0.123e-6■■□□□ 11.6
CSTF2TQ9H0L4 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.973e-6■■□□□ 11.6
CSTF2TQ9H0L4 LAMA5-208ENST00000474128 579 ntTSL 316.42■□□□□ 0.222e-6■■□□□ 11.6
CSTF2TQ9H0L4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.37■■□□□ 1.812e-7■■□□□ 11.6
CSTF2TQ9H0L4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.31■□□□□ 0.842e-7■■□□□ 11.6
CSTF2TQ9H0L4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.272e-7■■□□□ 11.6
CSTF2TQ9H0L4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.232e-7■■□□□ 11.6
CSTF2TQ9H0L4 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.472e-7■■□□□ 11.6
CSTF2TQ9H0L4 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC11.92□□□□□ -0.52e-7■■□□□ 11.6
CSTF2TQ9H0L4 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.582e-7■■□□□ 11.6
CSTF2TQ9H0L4 FN3KRP-207ENST00000574832 1422 ntTSL 217.76■□□□□ 0.434e-6■■□□□ 11.6
CSTF2TQ9H0L4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.424e-6■■□□□ 11.6
CSTF2TQ9H0L4 FN3KRP-206ENST00000574356 887 ntTSL 517.55■□□□□ 0.44e-6■■□□□ 11.6
CSTF2TQ9H0L4 FN3KRP-204ENST00000573158 627 ntTSL 315.49■□□□□ 0.074e-6■■□□□ 11.6
CSTF2TQ9H0L4 FN3KRP-205ENST00000574206 683 ntTSL 315.22■□□□□ 0.034e-6■■□□□ 11.6
CSTF2TQ9H0L4 FN3KRP-209ENST00000577128 515 ntTSL 511.99□□□□□ -0.494e-6■■□□□ 11.6
CSTF2TQ9H0L4 PAXIP1-204ENST00000457196 3990 ntTSL 520.01■□□□□ 0.793e-6■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-212ENST00000480679 505 ntTSL 519.62■□□□□ 0.734e-9■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-223ENST00000493222 864 ntTSL 319.62■□□□□ 0.734e-9■■□□□ 11.6
CSTF2TQ9H0L4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.653e-6■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-227ENST00000497510 722 ntTSL 419.07■□□□□ 0.644e-9■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-219ENST00000487469 1015 ntTSL 517.49■□□□□ 0.394e-9■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-213ENST00000482668 645 ntTSL 317.31■□□□□ 0.364e-9■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-215ENST00000483461 495 ntTSL 417.06■□□□□ 0.324e-9■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-205ENST00000466642 1023 ntTSL 416.58■□□□□ 0.244e-9■■□□□ 11.6
CSTF2TQ9H0L4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.233e-6■■□□□ 11.6
CSTF2TQ9H0L4 CDCA2-203ENST00000518225 464 ntTSL 516.39■□□□□ 0.213e-6■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.84■□□□□ 0.134e-9■■□□□ 11.6
CSTF2TQ9H0L4 ARHGAP6-208ENST00000495242 5303 ntTSL 1 (best)15.58■□□□□ 0.093e-6■■□□□ 11.6
CSTF2TQ9H0L4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.073e-6■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-214ENST00000483108 598 ntTSL 415.14■□□□□ 0.014e-9■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-217ENST00000484142 553 ntTSL 415.14■□□□□ 0.014e-9■■□□□ 11.6
CSTF2TQ9H0L4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -04e-9■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-206ENST00000467400 717 ntTSL 514.96□□□□□ -0.014e-9■■□□□ 11.6
Retrieved 100 of 19,151 protein–RNA pairs in 177.3 ms