Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HLA-DQB1-201ENST00000374943 1656 ntBASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 AC015936.2-201ENST00000593177 259 ntBASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 NME6-203ENST00000415644 849 ntTSL 2 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 RHOQP1-201ENST00000555758 579 ntBASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 AC092933.1-201ENST00000393644 945 ntBASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.35□□□□□ -0.59
ALMS1Q8TCU4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AP005482.1-201ENST00000563722 1273 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC135776.1-201ENST00000319817 2481 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 CDC14C-201ENST00000428251 1719 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC073439.1-201ENST00000624121 1774 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 REXO1L9P-201ENST00000604264 2108 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC023310.3-201ENST00000557027 670 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC100756.1-201ENST00000562736 682 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC138749.3-201ENST00000567691 622 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC116165.1-201ENST00000611806 668 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 MIR6869-201ENST00000619434 62 ntBASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.34□□□□□ -0.59
ALMS1Q8TCU4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms