Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 YBX1P2-201ENST00000489612 999 ntBASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 AL135999.2-201ENST00000622438 1686 ntBASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 Z83836.1-201ENST00000624605 1642 ntBASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 KRT8P10-201ENST00000450021 1447 ntBASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 AC246785.2-201ENST00000432512 513 ntBASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 AC009533.2-201ENST00000543664 586 ntBASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01561Q8N1V8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms