Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.44■□□□□ 0.06
SOX6P35712 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX6P35712 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SOX6P35712 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX6P35712 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SOX6P35712 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.43■□□□□ 0.06
SOX6P35712 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 MIR3180-4-201ENST00000582223 153 ntBASIC15.43■□□□□ 0.06
SOX6P35712 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX6P35712 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SOX6P35712 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 AL161772.1-201ENST00000610494 4412 ntBASIC15.43■□□□□ 0.06
SOX6P35712 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SOX6P35712 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX6P35712 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX6P35712 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 AC099063.4-201ENST00000641099 1602 ntBASIC15.43■□□□□ 0.06
SOX6P35712 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX6P35712 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX6P35712 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.42■□□□□ 0.06
SOX6P35712 AC092364.2-201ENST00000596710 2692 ntBASIC15.42■□□□□ 0.06
SOX6P35712 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SOX6P35712 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.42■□□□□ 0.06
SOX6P35712 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
SOX6P35712 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SOX6P35712 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.42■□□□□ 0.06
SOX6P35712 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.42■□□□□ 0.06
SOX6P35712 AP001412.1-201ENST00000608405 714 ntBASIC15.42■□□□□ 0.06
SOX6P35712 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.42■□□□□ 0.06
SOX6P35712 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 AC092384.3-202ENST00000564646 2873 ntBASIC15.42■□□□□ 0.06
SOX6P35712 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SOX6P35712 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.42■□□□□ 0.06
SOX6P35712 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SOX6P35712 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SOX6P35712 DBET-201ENST00000630918 3363 ntBASIC15.42■□□□□ 0.06
SOX6P35712 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SOX6P35712 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.42■□□□□ 0.06
SOX6P35712 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SOX6P35712 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.41■□□□□ 0.06
SOX6P35712 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SOX6P35712 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.41■□□□□ 0.06
SOX6P35712 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.41■□□□□ 0.06
SOX6P35712 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SOX6P35712 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SOX6P35712 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SOX6P35712 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SOX6P35712 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms