Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
BRAFP15056 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRAFP15056 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
BRAFP15056 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRAFP15056 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.67■□□□□ 0.42
BRAFP15056 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRAFP15056 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRAFP15056 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
BRAFP15056 AC233702.3-201ENST00000578656 1387 ntBASIC17.66■□□□□ 0.42
BRAFP15056 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.66■□□□□ 0.42
BRAFP15056 AC011270.2-201ENST00000624293 2550 ntBASIC17.66■□□□□ 0.42
BRAFP15056 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 RNF216P1-203ENST00000404404 2427 ntBASIC17.66■□□□□ 0.42
BRAFP15056 FER1L4-210ENST00000615531 5998 ntBASIC17.66■□□□□ 0.42
BRAFP15056 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 TSPY12P-201ENST00000421279 868 ntBASIC17.66■□□□□ 0.42
BRAFP15056 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.66■□□□□ 0.42
BRAFP15056 AP000867.3-201ENST00000524675 377 ntBASIC17.66■□□□□ 0.42
BRAFP15056 AP005901.3-202ENST00000581653 237 ntBASIC17.66■□□□□ 0.42
BRAFP15056 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.66■□□□□ 0.42
BRAFP15056 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.66■□□□□ 0.42
BRAFP15056 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BRAFP15056 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BRAFP15056 LINC02012-201ENST00000608206 1725 ntBASIC17.66■□□□□ 0.42
BRAFP15056 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.66■□□□□ 0.42
BRAFP15056 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BRAFP15056 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.66■□□□□ 0.42
BRAFP15056 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.66■□□□□ 0.42
BRAFP15056 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BRAFP15056 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
BRAFP15056 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.65■□□□□ 0.42
BRAFP15056 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
BRAFP15056 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.65■□□□□ 0.42
BRAFP15056 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.65■□□□□ 0.42
BRAFP15056 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.65■□□□□ 0.42
BRAFP15056 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.65■□□□□ 0.42
BRAFP15056 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.65■□□□□ 0.42
BRAFP15056 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.65■□□□□ 0.42
BRAFP15056 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.65■□□□□ 0.42
BRAFP15056 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BRAFP15056 AL353801.3-201ENST00000609898 542 ntBASIC17.65■□□□□ 0.42
BRAFP15056 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.65■□□□□ 0.42
BRAFP15056 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.65■□□□□ 0.42
BRAFP15056 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.65■□□□□ 0.42
BRAFP15056 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
BRAFP15056 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRAFP15056 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BRAFP15056 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BRAFP15056 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BRAFP15056 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BRAFP15056 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BRAFP15056 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BRAFP15056 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms