Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
KDM4BO94953 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
KDM4BO94953 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.13■□□□□ 0.01
KDM4BO94953 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.13■□□□□ 0.01
KDM4BO94953 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.13■□□□□ 0.01
KDM4BO94953 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.13■□□□□ 0.01
KDM4BO94953 AL136379.1-201ENST00000623471 2642 ntBASIC15.13■□□□□ 0.01
KDM4BO94953 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
KDM4BO94953 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
KDM4BO94953 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
KDM4BO94953 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.13■□□□□ 0.01
KDM4BO94953 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.13■□□□□ 0.01
KDM4BO94953 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDM4BO94953 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
KDM4BO94953 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
KDM4BO94953 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.12■□□□□ 0.01
KDM4BO94953 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.12■□□□□ 0.01
KDM4BO94953 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
KDM4BO94953 TSPY12P-201ENST00000421279 868 ntBASIC15.12■□□□□ 0.01
KDM4BO94953 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 AC117947.1-201ENST00000427448 529 ntBASIC15.12■□□□□ 0.01
KDM4BO94953 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.12■□□□□ 0.01
KDM4BO94953 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
KDM4BO94953 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.12■□□□□ 0.01
KDM4BO94953 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.12■□□□□ 0.01
KDM4BO94953 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.12■□□□□ 0.01
KDM4BO94953 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
KDM4BO94953 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.12■□□□□ 0.01
KDM4BO94953 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KDM4BO94953 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.12■□□□□ 0.01
KDM4BO94953 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
KDM4BO94953 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KDM4BO94953 BX276092.7-203ENST00000637198 1536 ntBASIC15.12■□□□□ 0.01
KDM4BO94953 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDM4BO94953 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
KDM4BO94953 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KDM4BO94953 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.11■□□□□ 0.01
KDM4BO94953 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
KDM4BO94953 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.11■□□□□ 0.01
KDM4BO94953 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.11■□□□□ 0.01
KDM4BO94953 AC092597.1-201ENST00000487352 616 ntBASIC15.11■□□□□ 0.01
KDM4BO94953 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.11■□□□□ 0.01
KDM4BO94953 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
KDM4BO94953 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.11■□□□□ 0.01
KDM4BO94953 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KDM4BO94953 AC116353.5-201ENST00000638148 1699 ntBASIC15.11■□□□□ 0.01
KDM4BO94953 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms