Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF253O75346 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 LINC01311-201ENST00000565162 1445 ntBASIC13.42□□□□□ -0.26
ZNF253O75346 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ZNF253O75346 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF253O75346 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF253O75346 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
ZNF253O75346 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF253O75346 ECEL1P2-202ENST00000465689 757 ntBASIC13.42□□□□□ -0.26
ZNF253O75346 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 MIR4497-201ENST00000583208 89 ntBASIC13.42□□□□□ -0.26
ZNF253O75346 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 AC141257.4-201ENST00000634557 245 ntBASIC13.42□□□□□ -0.26
ZNF253O75346 AC136944.6-201ENST00000634818 245 ntBASIC13.42□□□□□ -0.26
ZNF253O75346 AL031432.5-201ENST00000641059 760 ntBASIC13.42□□□□□ -0.26
ZNF253O75346 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 AC023824.1-201ENST00000562945 2975 ntBASIC13.42□□□□□ -0.26
ZNF253O75346 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ZNF253O75346 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF253O75346 AC026691.1-201ENST00000602502 2017 ntBASIC13.42□□□□□ -0.26
ZNF253O75346 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF253O75346 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ZNF253O75346 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ZNF253O75346 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF253O75346 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZNF253O75346 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 TSPY12P-201ENST00000421279 868 ntBASIC13.41□□□□□ -0.26
ZNF253O75346 KRT18P48-201ENST00000434763 852 ntBASIC13.41□□□□□ -0.26
ZNF253O75346 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 AC112698.1-201ENST00000510299 916 ntBASIC13.41□□□□□ -0.26
ZNF253O75346 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF253O75346 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF253O75346 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 AL136038.4-201ENST00000603606 1261 ntBASIC13.41□□□□□ -0.26
ZNF253O75346 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF253O75346 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF253O75346 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF253O75346 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF253O75346 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF253O75346 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF253O75346 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF253O75346 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF253O75346 KRT18P22-201ENST00000402024 1347 ntBASIC13.4□□□□□ -0.26
ZNF253O75346 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF253O75346 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF253O75346 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF253O75346 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF253O75346 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF253O75346 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF253O75346 KRT8P9-201ENST00000558927 1449 ntBASIC13.4□□□□□ -0.26
ZNF253O75346 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF253O75346 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ZNF253O75346 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms