Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA12O60330 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA12O60330 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGA12O60330 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
PCDHGA12O60330 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
PCDHGA12O60330 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA12O60330 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA12O60330 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA12O60330 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHGA12O60330 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA12O60330 AC011467.4-201ENST00000594891 528 ntBASIC17■□□□□ 0.31
PCDHGA12O60330 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA12O60330 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA12O60330 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA12O60330 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 REXO1L9P-201ENST00000604264 2108 ntBASIC16.99■□□□□ 0.31
PCDHGA12O60330 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 AC025580.3-201ENST00000617932 1424 ntBASIC16.99■□□□□ 0.31
PCDHGA12O60330 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 TSEN15P1-201ENST00000423257 515 ntBASIC16.99■□□□□ 0.31
PCDHGA12O60330 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 AC106028.4-201ENST00000614509 607 ntBASIC16.99■□□□□ 0.31
PCDHGA12O60330 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 AC080080.1-201ENST00000625121 2420 ntBASIC16.99■□□□□ 0.31
PCDHGA12O60330 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA12O60330 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA12O60330 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA12O60330 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA12O60330 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA12O60330 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA12O60330 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA12O60330 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA12O60330 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA12O60330 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 MYCLP1-201ENST00000372451 1075 ntBASIC16.98■□□□□ 0.31
PCDHGA12O60330 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA12O60330 LINC00982-205ENST00000420957 435 ntBASIC16.98■□□□□ 0.31
PCDHGA12O60330 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms