Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.23■□□□□ 0.99
SRGAP3O43295 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRGAP3O43295 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SRGAP3O43295 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRGAP3O43295 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SRGAP3O43295 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRGAP3O43295 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SRGAP3O43295 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.22■□□□□ 0.99
SRGAP3O43295 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SRGAP3O43295 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 MIR940-201ENST00000401276 94 ntBASIC21.22■□□□□ 0.99
SRGAP3O43295 IGLL3P-201ENST00000412472 434 ntBASIC21.22■□□□□ 0.99
SRGAP3O43295 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.22■□□□□ 0.99
SRGAP3O43295 AC124947.2-201ENST00000547118 1133 ntBASIC21.22■□□□□ 0.99
SRGAP3O43295 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 AC064836.3-201ENST00000607928 673 ntBASIC21.22■□□□□ 0.99
SRGAP3O43295 AC027601.4-201ENST00000611259 610 ntBASIC21.22■□□□□ 0.99
SRGAP3O43295 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.22■□□□□ 0.99
SRGAP3O43295 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.22■□□□□ 0.99
SRGAP3O43295 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
SRGAP3O43295 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.22■□□□□ 0.99
SRGAP3O43295 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SRGAP3O43295 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.21■□□□□ 0.99
SRGAP3O43295 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.21■□□□□ 0.99
SRGAP3O43295 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.21■□□□□ 0.99
SRGAP3O43295 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 MED15P5-201ENST00000423150 992 ntBASIC21.21■□□□□ 0.99
SRGAP3O43295 HCG4B-203ENST00000450128 991 ntBASIC21.21■□□□□ 0.99
SRGAP3O43295 POLD2P1-201ENST00000511220 997 ntBASIC21.21■□□□□ 0.99
SRGAP3O43295 KRT18P58-201ENST00000527480 1120 ntBASIC21.21■□□□□ 0.99
SRGAP3O43295 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.21■□□□□ 0.99
SRGAP3O43295 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.21■□□□□ 0.99
SRGAP3O43295 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.21■□□□□ 0.99
SRGAP3O43295 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.21■□□□□ 0.99
SRGAP3O43295 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.21■□□□□ 0.99
SRGAP3O43295 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.21■□□□□ 0.99
SRGAP3O43295 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.21■□□□□ 0.99
SRGAP3O43295 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.21■□□□□ 0.99
SRGAP3O43295 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.21■□□□□ 0.99
SRGAP3O43295 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRGAP3O43295 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SRGAP3O43295 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SRGAP3O43295 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
SRGAP3O43295 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.2■□□□□ 0.98
SRGAP3O43295 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.2■□□□□ 0.98
SRGAP3O43295 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.2■□□□□ 0.98
SRGAP3O43295 PMS2P1-201ENST00000431037 1228 ntBASIC21.2■□□□□ 0.98
SRGAP3O43295 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.2■□□□□ 0.98
SRGAP3O43295 KRT18P2-201ENST00000447938 1258 ntBASIC21.2■□□□□ 0.98
SRGAP3O43295 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.2■□□□□ 0.98
SRGAP3O43295 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.2■□□□□ 0.98
SRGAP3O43295 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SRGAP3O43295 FAM197Y3-203ENST00000618346 717 ntBASIC21.2■□□□□ 0.98
SRGAP3O43295 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SRGAP3O43295 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.2■□□□□ 0.98
SRGAP3O43295 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.2■□□□□ 0.98
SRGAP3O43295 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SRGAP3O43295 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.2■□□□□ 0.98
SRGAP3O43295 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.2■□□□□ 0.98
SRGAP3O43295 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRGAP3O43295 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.19■□□□□ 0.98
SRGAP3O43295 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
SRGAP3O43295 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SRGAP3O43295 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.19■□□□□ 0.98
SRGAP3O43295 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms