Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SHISA3A0PJX4 AL049757.1-201ENST00000616842 1596 ntBASIC14.96□□□□□ -0.01
SHISA3A0PJX4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHISA3A0PJX4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHISA3A0PJX4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHISA3A0PJX4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHISA3A0PJX4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.96□□□□□ -0.01
SHISA3A0PJX4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.96□□□□□ -0.01
SHISA3A0PJX4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 AL353692.3-201ENST00000407031 1396 ntBASIC14.96□□□□□ -0.02
SHISA3A0PJX4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHISA3A0PJX4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.95□□□□□ -0.02
SHISA3A0PJX4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 AC010491.1-201ENST00000563101 2797 ntBASIC14.95□□□□□ -0.02
SHISA3A0PJX4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 AP000523.1-201ENST00000398242 1049 ntBASIC14.95□□□□□ -0.02
SHISA3A0PJX4 AC007967.3-201ENST00000434308 558 ntBASIC14.95□□□□□ -0.02
SHISA3A0PJX4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 AL355075.4-201ENST00000554988 638 ntBASIC14.95□□□□□ -0.02
SHISA3A0PJX4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 GPR89P-201ENST00000407924 1495 ntBASIC14.95□□□□□ -0.02
SHISA3A0PJX4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHISA3A0PJX4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 AC034232.1-201ENST00000506026 1064 ntBASIC14.94□□□□□ -0.02
SHISA3A0PJX4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms