Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 UPK3BP1-201ENST00000428678 509 ntBASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 AL162727.3-201ENST00000635661 2787 ntBASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA11Q9Y5H2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 NUS1P2-201ENST00000417358 873 ntBASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AL020989.1-201ENST00000422979 469 ntBASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 ABCD1P5-201ENST00000445663 754 ntBASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 SIGLEC30P-201ENST00000455569 941 ntBASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AL591684.3-201ENST00000605187 298 ntBASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AL589935.2-201ENST00000616471 1231 ntBASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 PCDHA14-201ENST00000506751 2298 ntBASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 CICP6-201ENST00000457191 2729 ntBASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGA11Q9Y5H2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA11Q9Y5H2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms