Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.33e-6■■□□□ 11.7
CSTF2TQ9H0L4 ZNF276-209ENST00000568295 2206 ntTSL 223.1■■□□□ 1.293e-6■■□□□ 11.7
CSTF2TQ9H0L4 ZNF276-206ENST00000563983 3403 ntTSL 211.81□□□□□ -0.523e-6■■□□□ 11.7
CSTF2TQ9H0L4 CDRT4-203ENST00000524205 632 ntAPPRIS ALT2 TSL 29.66□□□□□ -0.866e-7■■□□□ 11.7
CSTF2TQ9H0L4 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC11.53□□□□□ -0.564e-11■■□□□ 11.7
CSTF2TQ9H0L4 ASGR2-206ENST00000576487 1055 ntTSL 1 (best)14.59□□□□□ -0.071e-7■■□□□ 11.7
CSTF2TQ9H0L4 ASGR2-205ENST00000574868 1202 ntTSL 514.17□□□□□ -0.141e-7■■□□□ 11.7
CSTF2TQ9H0L4 ASGR2-204ENST00000450034 932 ntTSL 213.18□□□□□ -0.31e-7■■□□□ 11.7
CSTF2TQ9H0L4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.331e-7■■□□□ 11.7
CSTF2TQ9H0L4 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.51e-7■■□□□ 11.7
CSTF2TQ9H0L4 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC11.95□□□□□ -0.51e-7■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.76□□□□□ -0.374e-11■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP9-205ENST00000619938 642 ntTSL 1 (best)10.47□□□□□ -0.734e-11■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP9-203ENST00000610585 903 ntTSL 310.21□□□□□ -0.774e-11■■□□□ 11.7
CSTF2TQ9H0L4 DUXAP9-207ENST00000621361 2397 ntTSL 1 (best)6.52□□□□□ -1.374e-11■■□□□ 11.7
CSTF2TQ9H0L4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.124e-11■■□□□ 11.7
CSTF2TQ9H0L4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.98□□□□□ -1.291e-7■■□□□ 11.7
CSTF2TQ9H0L4 IL23R-204ENST00000473881 1507 ntTSL 1 (best)6.01□□□□□ -1.451e-7■■□□□ 11.7
CSTF2TQ9H0L4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.461e-7■■□□□ 11.7
CSTF2TQ9H0L4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.62□□□□□ -1.831e-7■■□□□ 11.7
CSTF2TQ9H0L4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.345e-6■■□□□ 11.7
CSTF2TQ9H0L4 ZNRF1-207ENST00000568351 964 ntTSL 313.5□□□□□ -0.254e-6■■□□□ 11.7
CSTF2TQ9H0L4 ZNRF1-208ENST00000568494 2046 ntTSL 211.87□□□□□ -0.514e-6■■□□□ 11.7
CSTF2TQ9H0L4 ZNRF1-204ENST00000566244 3980 nt9.15□□□□□ -0.954e-6■■□□□ 11.7
CSTF2TQ9H0L4 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.98□□□□□ -0.333e-8■■□□□ 11.7
CSTF2TQ9H0L4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.851e-6■■□□□ 11.6
CSTF2TQ9H0L4 NINJ1-202ENST00000461162 861 ntTSL 212.64□□□□□ -0.391e-6■■□□□ 11.6
CSTF2TQ9H0L4 NINJ1-203ENST00000470314 834 ntTSL 312.34□□□□□ -0.431e-6■■□□□ 11.6
CSTF2TQ9H0L4 NINJ1-205ENST00000490564 488 ntTSL 1 (best)9.78□□□□□ -0.841e-6■■□□□ 11.6
CSTF2TQ9H0L4 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.544e-7■■□□□ 11.6
CSTF2TQ9H0L4 MHENCR-201ENST00000411579 582 ntTSL 218.67■□□□□ 0.587e-7■■□□□ 11.6
CSTF2TQ9H0L4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.09■□□□□ 0.337e-7■■□□□ 11.6
CSTF2TQ9H0L4 ACSF2-220ENST00000511288 838 ntTSL 1 (best)13.04□□□□□ -0.323e-7■■□□□ 11.6
CSTF2TQ9H0L4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.322e-10■■□□□ 11.6
CSTF2TQ9H0L4 ACSF2-215ENST00000508734 165 ntTSL 512.35□□□□□ -0.433e-7■■□□□ 11.6
CSTF2TQ9H0L4 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.562e-10■■□□□ 11.6
CSTF2TQ9H0L4 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.642e-10■■□□□ 11.6
CSTF2TQ9H0L4 ACSF2-210ENST00000506085 864 ntTSL 1 (best)10.65□□□□□ -0.73e-7■■□□□ 11.6
CSTF2TQ9H0L4 LRRC8D-205ENST00000525774 588 ntTSL 422.52■■□□□ 1.21e-6■■□□□ 11.6
CSTF2TQ9H0L4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.071e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-201ENST00000167218 1118 ntTSL 526.3■■□□□ 1.85e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.68■■□□□ 1.545e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-214ENST00000545869 900 ntTSL 522.25■■□□□ 1.155e-6■■□□□ 11.6
CSTF2TQ9H0L4 SOX13-209ENST00000534185 723 ntTSL 521.89■■□□□ 1.095e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-204ENST00000428005 1572 ntTSL 1 (best)20.68■□□□□ 0.95e-6■■□□□ 11.6
CSTF2TQ9H0L4 SOX13-208ENST00000530882 769 ntTSL 320.53■□□□□ 0.885e-6■■□□□ 11.6
CSTF2TQ9H0L4 LRP8-209ENST00000480045 3231 ntTSL 519.3■□□□□ 0.685e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.41■□□□□ 0.545e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.515e-6■■□□□ 11.6
CSTF2TQ9H0L4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.475e-6■■□□□ 11.6
CSTF2TQ9H0L4 NT5C2-207ENST00000461461 902 ntTSL 517.42■□□□□ 0.385e-6■■□□□ 11.6
CSTF2TQ9H0L4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.42■□□□□ 0.385e-6■■□□□ 11.6
CSTF2TQ9H0L4 TMEM120A-208ENST00000480538 668 ntTSL 217.21■□□□□ 0.355e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-207ENST00000539212 445 ntTSL 316.34■□□□□ 0.215e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.165e-6■■□□□ 11.6
CSTF2TQ9H0L4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.15e-6■■□□□ 11.6
CSTF2TQ9H0L4 SOX13-206ENST00000525442 538 ntTSL 415.67■□□□□ 0.15e-6■■□□□ 11.6
CSTF2TQ9H0L4 PDCD2-213ENST00000544866 710 ntTSL 515.6■□□□□ 0.095e-6■■□□□ 11.6
CSTF2TQ9H0L4 JMJD1C-211ENST00000633035 499 ntTSL 315.58■□□□□ 0.085e-6■■□□□ 11.6
CSTF2TQ9H0L4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.47■□□□□ 0.075e-6■■□□□ 11.6
CSTF2TQ9H0L4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.055e-6■■□□□ 11.6
CSTF2TQ9H0L4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.17■□□□□ 0.025e-6■■□□□ 11.6
CSTF2TQ9H0L4 SOX13-202ENST00000367203 3525 ntTSL 1 (best)14.92□□□□□ -0.025e-6■■□□□ 11.6
CSTF2TQ9H0L4 WWP2-215ENST00000568845 410 ntTSL 314.19□□□□□ -0.145e-6■■□□□ 11.6
CSTF2TQ9H0L4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.14□□□□□ -0.155e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.155e-6■■□□□ 11.6
CSTF2TQ9H0L4 SERF2-212ENST00000445816 2099 ntTSL 314.05□□□□□ -0.165e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-208ENST00000437266 3407 ntTSL 1 (best)14.04□□□□□ -0.165e-6■■□□□ 11.6
CSTF2TQ9H0L4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.175e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.93□□□□□ -0.185e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.215e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-210ENST00000512338 502 ntTSL 413.68□□□□□ -0.225e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-215ENST00000457377 3600 ntTSL 1 (best)13.52□□□□□ -0.245e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.255e-6■■□□□ 11.6
CSTF2TQ9H0L4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.265e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-209ENST00000438530 3825 ntTSL 1 (best)13.41□□□□□ -0.265e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.33□□□□□ -0.285e-6■■□□□ 11.6
CSTF2TQ9H0L4 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.2□□□□□ -0.35e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.35e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.315e-6■■□□□ 11.6
CSTF2TQ9H0L4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.315e-6■■□□□ 11.6
CSTF2TQ9H0L4 ZNF846-211ENST00000592587 548 ntTSL 512.86□□□□□ -0.355e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.85□□□□□ -0.355e-6■■□□□ 11.6
CSTF2TQ9H0L4 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.365e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.83□□□□□ -0.365e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.81□□□□□ -0.365e-6■■□□□ 11.6
CSTF2TQ9H0L4 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.385e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.385e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.68□□□□□ -0.385e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-209ENST00000507573 641 ntTSL 212.49□□□□□ -0.415e-6■■□□□ 11.6
CSTF2TQ9H0L4 ZNF846-203ENST00000586814 482 ntTSL 512.22□□□□□ -0.455e-6■■□□□ 11.6
CSTF2TQ9H0L4 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.465e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.475e-6■■□□□ 11.6
CSTF2TQ9H0L4 ACSS3-206ENST00000549175 534 ntTSL 511.92□□□□□ -0.55e-6■■□□□ 11.6
CSTF2TQ9H0L4 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.535e-6■■□□□ 11.6
CSTF2TQ9H0L4 ACSS3-208ENST00000616449 3833 nt11.71□□□□□ -0.545e-6■■□□□ 11.6
CSTF2TQ9H0L4 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.545e-6■■□□□ 11.6
CSTF2TQ9H0L4 WWP2-219ENST00000569658 583 ntTSL 211.4□□□□□ -0.585e-6■■□□□ 11.6
CSTF2TQ9H0L4 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC11.37□□□□□ -0.595e-6■■□□□ 11.6
CSTF2TQ9H0L4 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC11.2□□□□□ -0.625e-6■■□□□ 11.6
Retrieved 100 of 19,151 protein–RNA pairs in 249.7 ms