RNA–Protein interactions for RNA: ENST00000534185.1

SOX13-209, Transcript of SRY-box 13, humanhuman

TSL 5

Gene SOX13, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX13-209ENST00000534185 NISCHQ9Y2I1 1504 aa56.99■■■■■ 6.71
SOX13-209ENST00000534185 CCDC180Q9P1Z9 1646 aa50.73■■■■■ 5.71
SOX13-209ENST00000534185 ABCC9O60706 1549 aa49.75■■■■■ 5.55
SOX13-209ENST00000534185 RB1CC1Q8TDY2 1594 aa47.77■■■■■ 5.24
SOX13-209ENST00000534185 DCAF8L2P0C7V8 631 aa47.73■■■■■ 5.23
SOX13-209ENST00000534185 NACADO15069 1562 aa47.65■■■■■ 5.22
SOX13-209ENST00000534185 ZCCHC6Q5VYS8 1495 aaKnown RBP47.47■■■■■ 5.19
SOX13-209ENST00000534185 MYO15BQ96JP2 1530 aa47.25■■■■■ 5.16
SOX13-209ENST00000534185 DCAF1Q9Y4B6 1507 aa47.07■■■■■ 5.13
SOX13-209ENST00000534185 UNC13AQ9UPW8 1703 aa46.79■■■■■ 5.08
SOX13-209ENST00000534185 PABPN1Q86U42 306 aaKnown RBP eCLIP46.46■■■■■ 5.03
SOX13-209ENST00000534185 SCRIBQ14160 1630 aa46.39■■■■■ 5.02
SOX13-209ENST00000534185 BICRAQ9NZM4 1560 aa46.34■■■■■ 5.01
SOX13-209ENST00000534185 SHROOM4Q9ULL8 1493 aa45.73■■■■■ 4.91
SOX13-209ENST00000534185 DNAJC5BQ9UF47 199 aa45.62■■■■■ 4.89
SOX13-209ENST00000534185 EIF4G1Q04637 1599 aaKnown RBP45.13■■■■■ 4.82
SOX13-209ENST00000534185 CC2D2AQ9P2K1 1620 aa44.97■■■■■ 4.79
SOX13-209ENST00000534185 CECR2Q9BXF3 1484 aa44.66■■■■■ 4.74
SOX13-209ENST00000534185 SMARCA4P51532 1647 aa44.29■■■■■ 4.68
SOX13-209ENST00000534185 BAZ1AQ9NRL2 1556 aaPredicted RBP44.19■■■■■ 4.66
SOX13-209ENST00000534185 ATAD2BQ9ULI0 1458 aa44■■■■■ 4.63
SOX13-209ENST00000534185 MROH2BQ7Z745 1585 aa43.97■■■■■ 4.63
SOX13-209ENST00000534185 SMARCA2P51531 1590 aa43.96■■■■■ 4.63
SOX13-209ENST00000534185 NCAPD3P42695 1498 aa43.93■■■■■ 4.62
SOX13-209ENST00000534185 PEG3Q9GZU2 1588 aa43.77■■■■■ 4.6
SOX13-209ENST00000534185 HMGXB3Q12766 1538 aa43.77■■■■■ 4.6
SOX13-209ENST00000534185 BAZ1BQ9UIG0 1483 aaKnown RBP43.69■■■■■ 4.58
SOX13-209ENST00000534185 WIZO95785 1651 aa43.56■■■■■ 4.56
SOX13-209ENST00000534185 RSF1Q96T23 1441 aaPredicted RBP43.39■■■■■ 4.54
SOX13-209ENST00000534185 NESP48681 1621 aa43.04■■■■■ 4.48
SOX13-209ENST00000534185 TOP2AP11388 1531 aaKnown RBP43.02■■■■■ 4.48
SOX13-209ENST00000534185 ERCC6Q03468 1493 aa42.88■■■■■ 4.46
SOX13-209ENST00000534185 LAMC3Q9Y6N6 1575 aa42.86■■■■■ 4.45
SOX13-209ENST00000534185 CADPSQ9ULU8 1353 aa42.66■■■■■ 4.42
SOX13-209ENST00000534185 KIF21AQ7Z4S6 1674 aa42.58■■■■■ 4.41
SOX13-209ENST00000534185 PDS5BQ9NTI5 1447 aa42.53■■■■■ 4.4
SOX13-209ENST00000534185 CCDC88BA6NC98 1476 aa42.49■■■■■ 4.39
SOX13-209ENST00000534185 CFTRP13569 1480 aa42.41■■■■■ 4.38
SOX13-209ENST00000534185 THOC2Q8NI27 1593 aaKnown RBP42.39■■■■■ 4.38
SOX13-209ENST00000534185 CUX2O14529 1486 aa42.36■■■■■ 4.37
SOX13-209ENST00000534185 SUPT5HO00267 1087 aaKnown RBP42.35■■■■■ 4.37
SOX13-209ENST00000534185 FANCD2Q9BXW9 1451 aa42.24■■■■■ 4.35
SOX13-209ENST00000534185 PRDM2Q13029 1718 aa42.22■■■■■ 4.35
SOX13-209ENST00000534185 CEP164Q9UPV0 1460 aa42.21■■■■■ 4.35
SOX13-209ENST00000534185 MRC2Q9UBG0 1479 aa42.15■■■■■ 4.34
SOX13-209ENST00000534185 WDR62O43379 1518 aa42■■■■■ 4.31
SOX13-209ENST00000534185 URB2Q14146 1524 aaKnown RBP41.85■■■■■ 4.29
SOX13-209ENST00000534185 TOPBP1Q92547 1522 aa41.56■■■■■ 4.24
SOX13-209ENST00000534185 DNMBPQ6XZF7 1577 aa41.53■■■■■ 4.24
SOX13-209ENST00000534185 ABCC8Q09428 1581 aa41.47■■■■■ 4.23
SOX13-209ENST00000534185 IFT140Q96RY7 1462 aa41.28■■■■■ 4.2
SOX13-209ENST00000534185 CUX1P39880 1505 aa41.25■■■■■ 4.19
SOX13-209ENST00000534185 POLA1P09884 1462 aaPredicted RBP41.21■■■■■ 4.19
SOX13-209ENST00000534185 ZNF608Q9ULD9 1512 aaPredicted RBP41.17■■■■■ 4.18
SOX13-209ENST00000534185 TARBP1Q13395 1621 aaKnown RBP41.13■■■■■ 4.17
SOX13-209ENST00000534185 FGD5Q6ZNL6 1462 aa41.13■■■■■ 4.17
SOX13-209ENST00000534185 DNAJC5Q9H3Z4 198 aa41.08■■■■■ 4.17
SOX13-209ENST00000534185 RAD54L2Q9Y4B4 1467 aa41.07■■■■■ 4.16
SOX13-209ENST00000534185 EIF4G3O43432 1585 aaKnown RBP41.04■■■■■ 4.16
SOX13-209ENST00000534185 SOGA1O94964 1423 aa41.01■■■■■ 4.16
SOX13-209ENST00000534185 WRNQ14191 1432 aaPredicted RBP eCLIP40.94■■■■■ 4.14
SOX13-209ENST00000534185 SYNJ1O43426 1573 aa40.92■■■■■ 4.14
SOX13-209ENST00000534185 AQRO60306 1485 aaKnown RBP eCLIP40.91■■■■■ 4.14
SOX13-209ENST00000534185 BIVM-ERCC5R4GMW8 1640 aa40.89■■■■■ 4.14
SOX13-209ENST00000534185 TOP2BQ02880 1626 aa40.88■■■■■ 4.13
SOX13-209ENST00000534185 WDR97A6NE52 1622 aa40.82■■■■■ 4.13
SOX13-209ENST00000534185 TDRD9Q8NDG6 1382 aaKnown RBP40.82■■■■■ 4.12
SOX13-209ENST00000534185 ABCA10Q8WWZ4 1543 aa40.67■■■■■ 4.1
SOX13-209ENST00000534185 PBRM1Q86U86 1689 aa40.59■■■■■ 4.09
SOX13-209ENST00000534185 CHD1O14646 1710 aa40.58■■■■■ 4.09
SOX13-209ENST00000534185 ABCA5Q8WWZ7 1642 aa40.57■■■■■ 4.09
SOX13-209ENST00000534185 OSCARQ8IYS5 282 aa40.57■■■■■ 4.09
SOX13-209ENST00000534185 GAPVD1Q14C86 1478 aa40.56■■■■■ 4.08
SOX13-209ENST00000534185 SNAPC4Q5SXM2 1469 aa40.56■■■■■ 4.08
SOX13-209ENST00000534185 GRIN2BQ13224 1484 aa40.54■■■■■ 4.08
SOX13-209ENST00000534185 FBLN2P98095 1184 aa40.46■■■■■ 4.07
SOX13-209ENST00000534185 MAGI1Q96QZ7 1491 aaPredicted RBP40.44■■■■■ 4.06
SOX13-209ENST00000534185 SYNJ2O15056 1496 aa40.29■■■■■ 4.04
SOX13-209ENST00000534185 CHMP7Q8WUX9 453 aaPredicted RBP40.28■■■■■ 4.04
SOX13-209ENST00000534185 ADAMTS12P58397 1594 aa40.21■■■■■ 4.03
SOX13-209ENST00000534185 ERICH3Q5RHP9 1530 aa40.19■■■■■ 4.02
SOX13-209ENST00000534185 KIF27Q86VH2 1401 aa40.07■■■■■ 4
SOX13-209ENST00000534185 FHAD1B1AJZ9 1412 aa40.06■■■■■ 4
SOX13-209ENST00000534185 RIMBP3CA6NJZ7 1639 aa40.05■■■■■ 4
SOX13-209ENST00000534185 RIMBP3BA6NNM3 1639 aa40.05■■■■■ 4
SOX13-209ENST00000534185 RIMBP3Q9UFD9 1639 aa40.05■■■■■ 4
SOX13-209ENST00000534185 GRIN2AQ12879 1464 aa40.05■■■■■ 4
SOX13-209ENST00000534185 CLASP1Q7Z460 1538 aa40.04■■■■■ 4
SOX13-209ENST00000534185 ARHGEF11O15085 1522 aa39.99■■■■□ 3.99
SOX13-209ENST00000534185 TRIM41Q8WV44 630 aa39.93■■■■□ 3.98
SOX13-209ENST00000534185 CEP170Q5SW79 1584 aa39.9■■■■□ 3.98
SOX13-209ENST00000534185 IGF1RP08069 1367 aa39.87■■■■□ 3.97
SOX13-209ENST00000534185 CUL7Q14999 1698 aa39.87■■■■□ 3.97
SOX13-209ENST00000534185 NUP160Q12769 1436 aa39.82■■■■□ 3.97
SOX13-209ENST00000534185 RUSC2Q8N2Y8 1516 aa39.76■■■■□ 3.96
SOX13-209ENST00000534185 ARAP1Q96P48 1450 aa39.68■■■■□ 3.94
SOX13-209ENST00000534185 CARMIL1Q5VZK9 1371 aa39.67■■■■□ 3.94
SOX13-209ENST00000534185 CYB5RLQ6IPT4 315 aa39.61■■■■□ 3.93
SOX13-209ENST00000534185 SHROOM2Q13796 1616 aa39.58■■■■□ 3.93
SOX13-209ENST00000534185 ERCC6L2Q5T890 1561 aa39.55■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 261.3 ms