RNA–Protein interactions for RNA: ENST00000512338.1

CNBP-210, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

TSL 4

Gene CNBP, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-210ENST00000512338 NISCHQ9Y2I1 1504 aa36.61■■■■□ 3.45
CNBP-210ENST00000512338 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
CNBP-210ENST00000512338 ABCC9O60706 1549 aa32.67■■■□□ 2.82
CNBP-210ENST00000512338 RB1CC1Q8TDY2 1594 aa31.18■■■□□ 2.58
CNBP-210ENST00000512338 NACADO15069 1562 aa31■■■□□ 2.55
CNBP-210ENST00000512338 UNC13AQ9UPW8 1703 aa30.67■■■□□ 2.5
CNBP-210ENST00000512338 MYO15BQ96JP2 1530 aa30.64■■■□□ 2.5
CNBP-210ENST00000512338 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
CNBP-210ENST00000512338 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
CNBP-210ENST00000512338 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
CNBP-210ENST00000512338 BICRAQ9NZM4 1560 aa30.36■■■□□ 2.45
CNBP-210ENST00000512338 PABPN1Q86U42 306 aaKnown RBP eCLIP30.34■■■□□ 2.45
CNBP-210ENST00000512338 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
CNBP-210ENST00000512338 SCRIBQ14160 1630 aa29.91■■■□□ 2.38
CNBP-210ENST00000512338 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
CNBP-210ENST00000512338 CC2D2AQ9P2K1 1620 aa29.59■■■□□ 2.33
CNBP-210ENST00000512338 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
CNBP-210ENST00000512338 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
CNBP-210ENST00000512338 NCAPD3P42695 1498 aa28.59■■■□□ 2.17
CNBP-210ENST00000512338 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
CNBP-210ENST00000512338 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
CNBP-210ENST00000512338 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
CNBP-210ENST00000512338 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
CNBP-210ENST00000512338 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
CNBP-210ENST00000512338 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
CNBP-210ENST00000512338 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
CNBP-210ENST00000512338 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
CNBP-210ENST00000512338 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
CNBP-210ENST00000512338 CUX2O14529 1486 aa28.15■■■□□ 2.1
CNBP-210ENST00000512338 NESP48681 1621 aa28.13■■■□□ 2.09
CNBP-210ENST00000512338 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
CNBP-210ENST00000512338 DNAJC5Q9H3Z4 198 aa27.93■■■□□ 2.06
CNBP-210ENST00000512338 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
CNBP-210ENST00000512338 WIZO95785 1651 aa27.91■■■□□ 2.06
CNBP-210ENST00000512338 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
CNBP-210ENST00000512338 PDS5BQ9NTI5 1447 aa27.7■■■□□ 2.03
CNBP-210ENST00000512338 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
CNBP-210ENST00000512338 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
CNBP-210ENST00000512338 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
CNBP-210ENST00000512338 MRC2Q9UBG0 1479 aa27.52■■■□□ 2
CNBP-210ENST00000512338 WDR62O43379 1518 aa27.51■■■□□ 2
CNBP-210ENST00000512338 CFTRP13569 1480 aa27.44■■□□□ 1.98
CNBP-210ENST00000512338 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
CNBP-210ENST00000512338 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
CNBP-210ENST00000512338 PRDM2Q13029 1718 aa27.35■■□□□ 1.97
CNBP-210ENST00000512338 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
CNBP-210ENST00000512338 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
CNBP-210ENST00000512338 TOPBP1Q92547 1522 aa26.92■■□□□ 1.9
CNBP-210ENST00000512338 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
CNBP-210ENST00000512338 DNMBPQ6XZF7 1577 aa26.85■■□□□ 1.89
CNBP-210ENST00000512338 ZNF608Q9ULD9 1512 aaPredicted RBP26.84■■□□□ 1.89
CNBP-210ENST00000512338 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
CNBP-210ENST00000512338 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
CNBP-210ENST00000512338 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
CNBP-210ENST00000512338 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
CNBP-210ENST00000512338 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
CNBP-210ENST00000512338 POLA1P09884 1462 aaPredicted RBP26.66■■□□□ 1.86
CNBP-210ENST00000512338 CHD1O14646 1710 aa26.58■■□□□ 1.85
CNBP-210ENST00000512338 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
CNBP-210ENST00000512338 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
CNBP-210ENST00000512338 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
CNBP-210ENST00000512338 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.843e-7■■■□□ 18.6
CNBP-210ENST00000512338 RAD54L2Q9Y4B4 1467 aa26.52■■□□□ 1.84
CNBP-210ENST00000512338 CUX1P39880 1505 aa26.51■■□□□ 1.83
CNBP-210ENST00000512338 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
CNBP-210ENST00000512338 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
CNBP-210ENST00000512338 ARHGEF11O15085 1522 aa26.46■■□□□ 1.83
CNBP-210ENST00000512338 SOGA1O94964 1423 aa26.45■■□□□ 1.82
CNBP-210ENST00000512338 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
CNBP-210ENST00000512338 SNAPC4Q5SXM2 1469 aa26.33■■□□□ 1.81
CNBP-210ENST00000512338 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
CNBP-210ENST00000512338 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
CNBP-210ENST00000512338 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
CNBP-210ENST00000512338 CLASP1Q7Z460 1538 aa26.24■■□□□ 1.79
CNBP-210ENST00000512338 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
CNBP-210ENST00000512338 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
CNBP-210ENST00000512338 FBLN2P98095 1184 aa26.23■■□□□ 1.79
CNBP-210ENST00000512338 ARAP1Q96P48 1450 aa26.21■■□□□ 1.79
CNBP-210ENST00000512338 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.79
CNBP-210ENST00000512338 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
CNBP-210ENST00000512338 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
CNBP-210ENST00000512338 SYNJ1O43426 1573 aa26.17■■□□□ 1.78
CNBP-210ENST00000512338 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
CNBP-210ENST00000512338 TOP2BQ02880 1626 aa26.13■■□□□ 1.77
CNBP-210ENST00000512338 CYB5RLQ6IPT4 315 aa26.1■■□□□ 1.77
CNBP-210ENST00000512338 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
CNBP-210ENST00000512338 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
CNBP-210ENST00000512338 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
CNBP-210ENST00000512338 GRIN2AQ12879 1464 aa25.94■■□□□ 1.74
CNBP-210ENST00000512338 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
CNBP-210ENST00000512338 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
CNBP-210ENST00000512338 NUP160Q12769 1436 aa25.87■■□□□ 1.73
CNBP-210ENST00000512338 ERCC6L2Q5T890 1561 aa25.83■■□□□ 1.73
CNBP-210ENST00000512338 FHAD1B1AJZ9 1412 aa25.83■■□□□ 1.73
CNBP-210ENST00000512338 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
CNBP-210ENST00000512338 TRHP20396 242 aaPredicted RBP25.73■■□□□ 1.71
CNBP-210ENST00000512338 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
CNBP-210ENST00000512338 CUL7Q14999 1698 aa25.56■■□□□ 1.68
CNBP-210ENST00000512338 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
CNBP-210ENST00000512338 KIF27Q86VH2 1401 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms