Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 AL049637.2-201ENST00000641778 930 ntBASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKAP2Q8WWK9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 TSPY14P-201ENST00000303979 915 ntBASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 INGX-201ENST00000359239 846 ntBASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 AP003071.4-201ENST00000562276 1284 ntBASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 AC109462.3-201ENST00000573934 613 ntBASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKAP2Q8WWK9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 AC012618.2-201ENST00000428058 849 ntBASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 AL390955.1-201ENST00000428694 934 ntBASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 AC068472.1-201ENST00000474589 881 ntBASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 C2orf69P3-201ENST00000565542 1120 ntBASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 AC233702.5-201ENST00000584107 538 ntBASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKAP2Q8WWK9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms