Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB5BP61020 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 PRAL-201ENST00000624952 3286 ntBASIC13.44□□□□□ -0.26
RAB5BP61020 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 LINC01451-201ENST00000623792 534 ntBASIC13.44□□□□□ -0.26
RAB5BP61020 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 KRT8P9-201ENST00000558927 1449 ntBASIC13.44□□□□□ -0.26
RAB5BP61020 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAB5BP61020 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 AC107918.4-201ENST00000641966 3141 ntBASIC13.44□□□□□ -0.26
RAB5BP61020 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB5BP61020 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB5BP61020 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.43□□□□□ -0.26
RAB5BP61020 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB5BP61020 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB5BP61020 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB5BP61020 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RAB5BP61020 AC135279.3-201ENST00000610945 1311 ntBASIC13.43□□□□□ -0.26
RAB5BP61020 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RAB5BP61020 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
RAB5BP61020 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB5BP61020 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB5BP61020 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB5BP61020 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 KRT18P68-201ENST00000392293 1000 ntBASIC13.43□□□□□ -0.26
RAB5BP61020 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.43□□□□□ -0.26
RAB5BP61020 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB5BP61020 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB5BP61020 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 LINC00528-201ENST00000600723 2160 ntBASIC13.43□□□□□ -0.26
RAB5BP61020 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB5BP61020 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB5BP61020 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms